Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,179,330 T→C S170S (AGT→AGC)  yegT → nucleoside transporter, low affinity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,179,3300TC100.0% 261.4 / NA 72S170S (AGT→AGC) yegTnucleoside transporter, low affinity
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/36);  total (36/36)

TGATTTCCCGCGCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGTTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCG  >  NC_000913/2179195‑2179457
                                                                                                                                       |                                                                                                                               
tGATTTCCCGCGCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGctct                                                                                                                              >  2:1317097/1‑139 (MQ=255)
        cgcgCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTctgctctgct                                                                                                                      >  1:912025/1‑139 (MQ=255)
            cATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGgt                                                                                                                  >  2:1651938/1‑139 (MQ=255)
            cATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGgt                                                                                                                  <  1:246607/139‑1 (MQ=255)
                         ggCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCg                                                                                                                    >  1:1063454/1‑124 (MQ=255)
                         ggCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCg                                                                                                                    <  2:1063454/124‑1 (MQ=255)
                         ggCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGtttt                                                                                                     >  2:408977/1‑139 (MQ=255)
                         ggCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGtttt                                                                                                     >  1:1501713/1‑139 (MQ=255)
                         ggCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGtttt                                                                                                     >  1:1661878/1‑139 (MQ=255)
                           cACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTc                                                                                                   <  1:763567/139‑1 (MQ=255)
                           cACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTc                                                                                                   >  2:136793/1‑139 (MQ=255)
                            aCTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTcc                                                                                                  <  1:1192704/139‑1 (MQ=255)
                              tATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTg                                                                                                >  1:1206541/1‑139 (MQ=255)
                                     tGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  2:1661878/139‑1 (MQ=255)
                                     tGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  2:1206541/139‑1 (MQ=255)
                                        aTTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTctgctctgct                                                                                                                      <  1:698252/107‑1 (MQ=255)
                                        aTTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTctgctctgct                                                                                                                      >  2:698252/1‑107 (MQ=255)
                                        aTTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGc                                                                                      >  2:537612/1‑139 (MQ=255)
                                          tGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGcca                                                                                    <  1:537612/139‑1 (MQ=255)
                                                              gTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAAt                                                                <  2:1501713/139‑1 (MQ=255)
                                                              gTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAAt                                                                <  1:1476593/139‑1 (MQ=255)
                                                                 tCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgct                                                                                                                           <  1:810498/77‑1 (MQ=255)
                                                                 tCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgct                                                                                                                           >  2:810498/1‑77 (MQ=255)
                                                                 tCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTG‑TTGCGTTTCTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGat                                                            >  1:635682/1‑139 (MQ=255)
                                                                          aaaTACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGt                                                    <  1:1651938/139‑1 (MQ=255)
                                                                                tGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCt                                              >  1:323500/1‑139 (MQ=255)
                                                                                   ggTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCg                                                                                                                    >  2:600677/1‑66 (MQ=255)
                                                                                   ggTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCg                                                                                                                    <  1:600677/66‑1 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgctc                                                                                                                          >  2:1323584/1‑56 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgctc                                                                                                                          <  1:1323584/56‑1 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATg                                                               >  2:407949/1‑115 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATg                                                               <  1:407949/115‑1 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCt                                              <  2:1556795/132‑1 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCt                                              >  1:1556795/1‑132 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTg                                       >  1:1017736/1‑139 (MQ=255)
                                                                                       tGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTg                                       >  1:186790/1‑139 (MQ=255)
                                                                                        gCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCaaa                                                                               >  2:253165/1‑98 (MQ=255)
                                                                                        gCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCaaa                                                                               <  1:253165/98‑1 (MQ=255)
                                                                                        gCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCt                                        <  2:1711756/137‑1 (MQ=255)
                                                                                        gCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCt                                        >  1:1711756/1‑137 (MQ=255)
                                                                                        gCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTgg                                      >  1:117650/1‑139 (MQ=255)
                                                                                         ccGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  1:994985/87‑1 (MQ=255)
                                                                                         ccGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         >  2:994985/1‑87 (MQ=255)
                                                                                         ccGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGa                                     <  1:136793/139‑1 (MQ=255)
                                                                                            atatCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgc                                                                                                                            >  2:510494/1‑49 (MQ=255)
                                                                                            atatCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgc                                                                                                                            <  1:510494/49‑1 (MQ=255)
                                                                                            atatCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATgc                                  <  2:323500/139‑1 (MQ=255)
                                                                                             tatCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATgcg                                 >  1:773152/1‑139 (MQ=255)
                                                                                              atCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         >  1:140180/1‑82 (MQ=255)
                                                                                              atCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  2:140180/82‑1 (MQ=255)
                                                                                                   aCCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgctc                                                                                                                          <  1:1674737/44‑1 (MQ=255)
                                                                                                   aCCGACTAACATCCCGCTGCTGATTACCGCCGGAAGCtctgctc                                                                                                                          >  2:1674737/1‑44 (MQ=255)
                                                                                                       aCTAACATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCa                                                                    <  2:1155439/94‑1 (MQ=255)
                                                                                                       aCTAACATCCCGCTGCTGAGTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCa                                                                    >  1:1155439/1‑94 (MQ=255)
                                                                                                           aCATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTgcg                   <  1:744072/139‑1 (MQ=255)
                                                                                                           aCATCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTgcg                   <  2:773152/139‑1 (MQ=255)
                                                                                                             aTCCCGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGcgcg                 >  2:262430/1‑139 (MQ=255)
                                                                                                               cccGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGgtgtgt                                                                                                              <  1:612996/44‑1 (MQ=255)
                                                                                                               cccGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGgtgtgt                                                                                                              >  2:612996/1‑44 (MQ=255)
                                                                                                               cccGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGc                                                                                      >  2:1416470/1‑68 (MQ=255)
                                                                                                               cccGCTGCTGATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGc                                                                                      <  1:1416470/68‑1 (MQ=255)
                                                                                                                      ctgATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGc                                                                                      >  2:500137/1‑61 (MQ=255)
                                                                                                                      ctgATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGc                                                                                      <  1:500137/61‑1 (MQ=255)
                                                                                                                      ctgATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATg                                                <  1:927726/99‑1 (MQ=255)
                                                                                                                      ctgATTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATg                                                >  2:927726/1‑99 (MQ=255)
                                                                                                                         aTTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  1:881536/55‑1 (MQ=255)
                                                                                                                         aTTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         >  2:881536/1‑55 (MQ=255)
                                                                                                                         aTTACCGCCGGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCCGCTGCGCGATAAAAACTTcc     <  2:1017736/139‑1 (MQ=255)
                                                                                                                            aCCGCCGGAAGCTCTTCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACTACAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCTGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCg  <  2:573726/139‑1 (MQ=255)
                                                                                                                                ccgGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         >  1:275479/1‑48 (MQ=255)
                                                                                                                                ccgGAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGaca                                                                                         <  2:275479/48‑1 (MQ=255)
                                                                                                                                   gAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAAt                                                                <  2:529976/70‑1 (MQ=255)
                                                                                                                                   gAAGCTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAAt                                                                >  1:529976/1‑70 (MQ=255)
                                                                                                                                       |                                                                                                                               
TGATTTCCCGCGCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGTTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCG  >  NC_000913/2179195‑2179457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑