Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,835,045 G→A *378* (TAG→TAA)  norW → NADH:flavorubredoxin oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,835,0450GA100.0% 183.4 / NA 56*378* (TAG→TAA) norWNADH:flavorubredoxin oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (27/29);  total (27/29)

CAAATTAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAT  >  NC_000913/2834917‑2835176
                                                                                                                                |                                                                                                                                   
cAAATTAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACt                                                                                                                           <  2:1505787/139‑1 (MQ=255)
    ttAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATACTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGc                                                                                                                       >  2:1228846/1‑139 (MQ=255)
         aCCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTaaa                                                                                                                  <  2:695340/139‑1 (MQ=255)
                   aGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAGCATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATg                                                                                                        <  2:356723/139‑1 (MQ=255)
                        aTGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACg                                                                                                   <  1:1228846/139‑1 (MQ=255)
                              gcgcgcGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGgcg                                                                                             <  2:424027/139‑1 (MQ=255)
                                   cggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGa                                                                                                     <  2:939224/126‑1 (MQ=255)
                                   cggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGa                                                                                                     >  1:939224/1‑126 (MQ=255)
                                   cggcgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCt                                                                                        >  2:1386162/1‑139 (MQ=255)
                                      cgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTgg                                                                                               <  2:716736/129‑1 (MQ=255)
                                      cgTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTgg                                                                                               >  1:716736/1‑129 (MQ=255)
                                       gTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                                    <  1:1079759/139‑1 (MQ=255)
                                          gACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGa                                                                                 >  1:62520/1‑139 (MQ=255)
                                           aCGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGCCGCTGGCGCGTCTTATCCg                                                                                  >  1:1020355/1‑137 (MQ=255)
                                           aCGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCAACGCTGGCGCGTCTTATCCg                                                                                  <  2:1020355/137‑1 (MQ=255)
                                                  tGACCAGCTTCTCGCCTTTGTGGTCAGTGA‑‑‑‑‑GGATGAAAGAGGCATTTGGATTATTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                                   >  2:1004407/1‑124 (MQ=38)
                                                  tGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                         <  2:101574/139‑1 (MQ=255)
                                                  tGACCAGCTTCGCGCCTTTGTGGTCAGTGA‑‑‑‑‑GGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATcc                                                                                   <  1:1004407/124‑1 (MQ=38)
                                                       aGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGc                                                                    <  1:1032814/139‑1 (MQ=255)
                                                                   ttGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCg                                                        >  1:973507/1‑139 (MQ=255)
                                                                         tCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATgtgt                                                              >  1:731069/1‑127 (MQ=255)
                                                                         tCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATgtgt                                                              <  2:731069/127‑1 (MQ=255)
                                                                           aGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGc                                                >  2:41188/1‑139 (MQ=255)
                                                                             tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAGACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGt                                                                                          >  2:799863/1‑95 (MQ=255)
                                                                             tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGt                                                                                          <  1:799863/95‑1 (MQ=255)
                                                                             tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                              >  2:468839/1‑139 (MQ=255)
                                                                             tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                              >  1:146216/1‑139 (MQ=255)
                                                                             tGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                              >  1:635343/1‑139 (MQ=255)
                                                                                     ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                      >  2:1229484/1‑139 (MQ=255)
                                                                                       aTGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCa                                    <  2:62520/139‑1 (MQ=255)
                                                                                                gCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTa                                                                                                                             >  1:1287225/1‑41 (MQ=255)
                                                                                                gCATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTa                                                                                                                             <  2:1287225/41‑1 (MQ=255)
                                                                                                 cATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACt                                                                                                                           >  1:615266/1‑42 (MQ=255)
                                                                                                 cATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACt                                                                                                                           <  2:615266/42‑1 (MQ=255)
                                                                                                 cATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                          >  2:249490/1‑139 (MQ=255)
                                                                                                 cATTTGGATTGTTGAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                          >  2:194967/1‑139 (MQ=255)
                                                                                                          tgttgAAAACATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                 <  1:1229484/139‑1 (MQ=255)
                                                                                                                aaaCATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac           <  2:973507/139‑1 (MQ=255)
                                                                                                                 aaCATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                 <  1:558871/132‑1 (MQ=255)
                                                                                                                 aaCATTGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                 >  2:558871/1‑132 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACg                                                                                                   <  2:1704250/45‑1 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACg                                                                                                   >  1:1704250/1‑45 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGc                                                                    >  2:603710/1‑76 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGc                                                                    <  1:603710/76‑1 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                          <  2:458055/118‑1 (MQ=255)
                                                                                                                      tGCCGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                          >  1:458055/1‑118 (MQ=255)
                                                                                                                         cGATGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt  <  1:194967/139‑1 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTgg                                                                                               >  2:380216/1‑44 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTgg                                                                                               <  1:380216/44‑1 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                  <  1:841536/89‑1 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                  >  2:841536/1‑89 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                         <  2:566063/98‑1 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                         >  1:566063/1‑98 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                               <  2:1729909/108‑1 (MQ=255)
                                                                                                                           aTGTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                               >  1:1729909/1‑108 (MQ=255)
                                                                                                                             gTAAGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                              <  1:1132903/59‑1 (MQ=255)
                                                                                                                                |                                                                                                                                   
CAAATTAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAT  >  NC_000913/2834917‑2835176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑