Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,931,183 (G)7→8 intergenic (‑90/‑133) ravA ← / → kup hexameric AAA+ MoxR family ATPase, putative molecular chaperone/potassium transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,931,1761.G100.0% 166.2 / NA 47intergenic (‑83/‑140)ravA/kuphexameric AAA+ MoxR family ATPase, putative molecular chaperone/potassium transporter
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (20/27);  total (20/27)

GCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑GGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGA  >  NC_000913/3931055‑3931304
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gCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGTCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCt                                                                                                                  >  2:834606/1‑139 (MQ=255)
gCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCt                                                                                                                  <  2:501979/139‑1 (MQ=255)
     aaaTTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAg                                                                                                             <  2:385825/139‑1 (MQ=255)
      aaTTCTTTCCGCTAATAAATGAGGGTCAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGc                                                                                                            <  2:671782/139‑1 (MQ=255)
          cTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAgg                                                                                                        >  1:887623/1‑139 (MQ=255)
                   aataaATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTgg                                                                                               <  1:56230/139‑1 (MQ=255)
                            gggTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGc                                                                                                            <  2:795801/117‑1 (MQ=255)
                            gggTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGc                                                                                                            >  1:795801/1‑117 (MQ=255)
                             ggTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCCGGTTAATGTGGCCGCATTTAg                                                                                     >  1:625942/1‑139 (MQ=255)
                                gAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAg                                                                                  >  2:424981/1‑139 (MQ=255)
                                 aGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGt                                                                                 >  1:380463/1‑139 (MQ=255)
                                 aGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGt                                                                                 >  1:536155/1‑139 (MQ=255)
                                  gCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTa                                                                                >  1:681255/1‑139 (MQ=255)
                                       aaTGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGAtt                                                                           >  1:402376/1‑139 (MQ=255)
                                            aGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGcc                                                                      <  2:681255/139‑1 (MQ=255)
                                             gTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCg                                                                     >  1:734170/1‑139 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGcc                                                                                             <  1:426855/112‑1 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGcc                                                                                             >  2:426855/1‑112 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTa                                                                  >  1:65177/1‑139 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTa                                                                  <  2:402376/139‑1 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTa                                                                  <  1:456587/139‑1 (MQ=255)
                                                gCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTa                                                                  <  2:380463/139‑1 (MQ=255)
                                                          gTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATa                                                        >  1:697817/1‑139 (MQ=255)
                                                             aaaaGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑gggg                                                                                                                              >  2:204360/1‑65 (MQ=255)
                                                             aaaaGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑gggg                                                                                                                              <  1:204360/65‑1 (MQ=255)
                                                              aaaGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACtgt                                                    <  2:513820/139‑1 (MQ=255)
                                                                    cTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCtt                                              <  1:834606/139‑1 (MQ=255)
                                                                       cGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCttttt                                           >  2:747011/1‑139 (MQ=255)
                                                                        gTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAg                                                                                                             >  1:871954/1‑72 (MQ=255)
                                                                        gTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAg                                                                                                             <  2:871954/72‑1 (MQ=255)
                                                                           aaTTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTtgtg                                       <  1:424981/139‑1 (MQ=255)
                                                                             ttGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTggg                                     <  2:65177/139‑1 (MQ=255)
                                                                                cGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCa                                  <  2:544603/139‑1 (MQ=255)
                                                                                  aGTATAGGCGTTTTTTGCTGGGTGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAg                                <  2:625942/139‑1 (MQ=255)
                                                                                    tataGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAggg                              <  2:536155/139‑1 (MQ=255)
                                                                                            tttCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTTTTTTTCTTTGAGCCAGGTTAATGTGGTCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGTCAAGGGACTAAGca                      <  1:641908/139‑1 (MQ=255)
                                                                                            tttCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGca                      <  2:481705/139‑1 (MQ=255)
                                                                                              tCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGcaca                    <  2:887623/139‑1 (MQ=255)
                                                                                               cTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGcacac                   <  2:734170/139‑1 (MQ=255)
                                                                                                ttGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGcacaca                  <  1:241016/139‑1 (MQ=255)
                                                                                                       tggCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATa                                                        >  2:377261/1‑94 (MQ=255)
                                                                                                       tggCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATa                                                        <  1:377261/94‑1 (MQ=255)
                                                                                                       tggCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCata           >  1:469856/1‑139 (MQ=255)
                                                                                                        ggCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGcaca                    <  2:462444/129‑1 (MQ=255)
                                                                                                        ggCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGcaca                    >  1:462444/1‑129 (MQ=255)
                                                                                                         gCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTTCATACTGTGCGCTTTTTTGTGGGCCa                                  >  1:893336/1‑114 (MQ=255)
                                                                                                         gCTAAAATAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCa                                  <  2:893336/114‑1 (MQ=255)
                                                                                                              aaTAGTCTTAAAGGGGGGGGTATTTTTATTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAAc    >  2:425789/1‑139 (MQ=255)
                                                                                                                tAGTCTCAAAGGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGa  <  2:469856/139‑1 (MQ=255)
                                                                                                                          |                                                                                                                                
GCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAA‑GGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGA  >  NC_000913/3931055‑3931304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑