| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 37 [0] | [0] 37 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 37 (1.100) | 31/206 | 0.1 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
GGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4490008‑4490115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGG > NC_000913/4490127‑4490260 GGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT > 2:691294/1‑119GGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT < 1:691294/119‑1 TCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGT < 2:75914/139‑1 TTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC > 1:192546/1‑108 TTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC < 2:192546/108‑1 TCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTG < 2:628604/84‑1 TCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTG > 1:628604/1‑84 ACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTG < 1:120881/82‑1 ACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTG > 2:120881/1‑82 TATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG > 2:717265/1‑98 TATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG < 1:717265/98‑1 ATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCT > 2:748793/1‑139 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATT > 1:320284/1‑133 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATT < 2:320284/133‑1 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGAT > 2:820647/1‑80 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGAT < 1:820647/80‑1 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAG > 1:668520/1‑139 AGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAAC < 1:748793/139‑1 CTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGG > 2:181311/1‑139 CTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 1:708271/1‑62 CTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC < 2:708271/62‑1 TGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT > 1:155572/1‑44 TGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT < 2:155572/44‑1 CCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCG < 1:265507/139‑1 AGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGGGTTGCCATGATAAATCTGATACCCGAGGTCGAGTGTGGTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGAGGCCATCCGAC > 2:65127/1‑139 AGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTGAAAGCGTGGTGCCGTGATAAATCTGATACTCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAC < 2:154617/139‑1 ACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGT < 2:413925/86‑1 ACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGT > 1:413925/1‑86 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGATGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCT > 2:174377/1‑107 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGATGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCT < 1:174377/107‑1 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATAT > 2:447246/1‑139 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATAC > 2:518527/1‑60 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATAC < 1:518527/60‑1 GGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA < 2:781412/65‑1 GGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA > 1:781412/1‑65 GCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAAC < 1:447246/139‑1 AGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGG < 1:671969/139‑1 GGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4490008‑4490115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGG > NC_000913/4490127‑4490260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |