| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 34 [0] | [0] 30 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 26 (0.790) | 22/202 | 0.4 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter | |||||
GTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTT > NC_000913/2614475‑2614750 | gTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCC < 1:40967‑M1/139‑1 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCC < 2:32771‑M1/136‑1 (MQ=255) aTTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCC > 1:32771‑M1/1‑136 (MQ=255) ggCGTTCGTTATGCGACAAAATCGTCGCCATGCTTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCACTCGCCATTTCGCCCCccccttctg > 1:210272‑M1/1‑130 (MQ=255) aCAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacag < 1:492103‑M1/139‑25 (MQ=255) gCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggca > 2:755735‑M1/1‑93 (MQ=255) ccATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcact < 1:220172‑M1/139‑49 (MQ=255) tCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgac > 1:300337‑M1/1‑88 (MQ=255) gCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc > 2:611022‑M1/1‑74 (MQ=255) gCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc < 1:611022‑M1/88‑15 (MQ=255) cAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctg > 2:414040‑M1/1‑72 (MQ=255) cAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctg < 1:414040‑M1/81‑10 (MQ=255) aCTGTATTGCCAATTTGTTTGTGATTCCGTTGGTCATTGCCATTCGCCATTTCGCCCCcctcttctggcagctggcgcacagtagcgcagacaattttccgccactgacggtcagccattttattaccgccaagctgct < 2:185027‑M1/139‑82 (MQ=255) ccAATTTGTTTGTGATTCGGTTCGCCATTGCCATTCGCCATTTCGCCCC > 2:465190‑M1/1‑49 (MQ=255) ccAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCC < 1:465190‑M1/49‑1 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctg < 2:691317‑M1/60‑17 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctg > 1:691317‑M1/1‑44 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc < 1:434340‑M1/58‑15 (MQ=255) ttgtttgtGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc > 2:434340‑M1/1‑44 (MQ=255) gtgATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc > 2:241102‑M1/1‑38 (MQ=255) gtgATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagc < 1:241102‑M1/52‑15 (MQ=255) aTTCCGTTCGCCATTGCCAGTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatatta > 1:558401‑M1/1‑35 (MQ=255) ttCCGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattat < 1:755735‑M1/139‑106 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc > 2:27474‑M1/1‑31 (MQ=255) cGTTCGCCATTGCCATTCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagc < 1:27474‑M1/89‑59 (MQ=255) tgccattCGCCATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtg < 1:242131‑M1/139‑119 (MQ=255) tgccattCGCCATTTCGCCCCccccttctggcagc > 2:787132‑M1/1‑21 (MQ=255) tgccattCGCCATTTCGCCCCccccttctggcagc < 1:787132‑M1/35‑15 (MQ=255) cattCGCCATTCCGCCCCccccttctggcagctggcgcatagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctg < 1:21942‑M1/139‑122 (MQ=255) cATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgat < 2:161416‑M1/101‑91 (MQ=255) cATTTCGCCCCccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgat > 1:161416‑M1/1‑11 (MQ=255) ccccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcggtgctggtgagtatgtgttatc < 1:417327‑M1/139‑138 (MQ=255) cccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg > 2:190763‑M1/1‑1 (MQ=255) cccccttctggcagctggcgcacagtagcgcagacaattttccggcactgacggtcagccattttattaccgccaatctgctcccggtgatgctgggtaatattatcggcggtgcg < 1:190763‑M1/116‑116 (MQ=255) | GTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTT > NC_000913/2614475‑2614750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |