| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,893,961 | Δ3 bp | coding (43‑45/261 nt) | ygcO → | putative 4Fe‑4S cluster‑containing protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2893961 | 2893963 | 3 | 38 [0] | [0] 38 | ygcO | putative 4Fe‑4S cluster‑containing protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2893960 | 0 (0.000) | 38 (1.130) | 32/206 | 0.1 | 100% | coding (42/261 nt) | ygcO | putative 4Fe‑4S cluster‑containing protein |
| ? | NC_000913 | 2893964 = | 0 (0.000) | coding (46/261 nt) | ygcO | putative 4Fe‑4S cluster‑containing protein | |||||
ACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC > NC_000913/2893829‑2894099 | taagcctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTg > 2:539174‑M2/136‑139 (MQ=255) gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGc < 1:759040‑M2/11‑1 (MQ=255) tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTg > 1:61509‑M2/127‑139 (MQ=255) ccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTc < 2:183798‑M2/17‑1 (MQ=255) ctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGt > 1:387947‑M2/120‑139 (MQ=255) tgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGtt < 1:539174‑M2/21‑1 (MQ=255) gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTg > 1:223655‑M2/118‑139 (MQ=255) ggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCa > 2:139518‑M2/104‑139 (MQ=255) tggcatctggcaggcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc < 1:646510‑M2/62‑1 (MQ=255) gcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt < 2:253930‑M2/43‑1 (MQ=255) gcgatgttatcaggagtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt > 1:253930‑M2/65‑107 (MQ=255) agtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt < 1:494111‑M2/43‑1 (MQ=255) agtctgcgatgtctgtaaccagtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt > 2:494111‑M2/51‑93 (MQ=255) gtctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt < 2:387947‑M2/90‑1 (MQ=255) tctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCtttt > 2:145491‑M2/49‑119 (MQ=255) tctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCtttt < 1:145491‑M2/71‑1 (MQ=255) tctgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa > 1:401922‑M2/49‑139 (MQ=255) tgcgatgtctgtgacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCCCACACCGGAAGGTAAc > 2:135926‑M2/47‑139 (MQ=255) tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg > 2:324586‑M2/47‑88 (MQ=255) tgcgatgtctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACgg < 1:324586‑M2/42‑1 (MQ=255) ctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa > 2:796231‑M2/39‑77 (MQ=255) ctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa < 1:796231‑M2/39‑1 (MQ=255) ctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca < 1:748821‑M2/79‑1 (MQ=255) ctgtaacccgtaatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca > 2:748821‑M2/39‑117 (MQ=255) taatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGc > 2:282225‑M2/29‑139 (MQ=255) aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa < 1:282225‑M2/112‑1 (MQ=255) aatctctggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCCCACACCGGAAGGTAACTTACGTATTGACTATCGCa < 1:135926‑M2/112‑1 (MQ=255) tggcgcgttgctgatgcgccgATTGTTCCGGTTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGcc > 1:155222‑M2/22‑139 (MQ=255) ggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt < 1:354646‑M2/77‑1 (MQ=255) ggcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt > 2:354646‑M2/21‑97 (MQ=255) gcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAg > 2:321002‑M2/20‑43 (MQ=255) gcgcgttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAg < 1:321002‑M2/24‑1 (MQ=255) ttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa < 2:603007‑M2/87‑1 (MQ=255) ttgctgatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa > 1:603007‑M2/15‑101 (MQ=255) gatgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCa > 1:529302‑M2/10‑139 (MQ=255) atgcgccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc < 2:223655‑M2/131‑1 (MQ=255) ccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc > 2:233828‑M2/4‑139 (MQ=255) ccgATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTATTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc > 2:480845‑M2/4‑139 (MQ=255) | ACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCC > NC_000913/2893829‑2894099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |