Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,647,4810TC42.7% 17.5 / 94.0 75C395R (TGC→CGC) gorglutathione oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (24/19);  new base C (16/16);  total (40/35)
Fisher's exact test for biased strand distribution p-value = 6.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.63e-01
Rejected as consensus: Frequency below/above cutoff threshold.

TACTGTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACC  >  NC_000913/3647348‑3647616
                                                                                                                                     |                                                                                                                                       
tACTGTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGtt                                                                                                                                    >  2:470376/1‑139 (MQ=255)
    gTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                <  2:227096/139‑1 (MQ=255)
    gTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                <  2:292592/139‑1 (MQ=255)
     ttGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATc                                                                                                                               >  2:116166/1‑139 (MQ=255)
     ttGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATc                                                                                                                               >  2:128819/1‑139 (MQ=255)
       ggTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCgg                                                                                                                             >  2:46333/1‑139 (MQ=255)
                 aaCCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGAt                                                                                                                   <  1:46333/139‑1 (MQ=255)
                  aCCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGAATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGAtt                                                                                                                  >  1:138508/1‑139 (MQ=255)
                      cAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCg                                                                                                              <  2:51663/139‑1 (MQ=255)
                             gcgAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCa                                                                                                       <  1:470376/139‑1 (MQ=255)
                                 gCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGc                                                                                                   <  1:839009/139‑1 (MQ=255)
                                        ggCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCt                                                                                            <  1:174564/139‑1 (MQ=255)
                                             cgaTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCGCCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGGATTCACGGCATTGGCTTTGGt                                                                                       <  2:33942/139‑1 (MQ=255)
                                               aTCAGGTGAAAGTGTATCAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCTGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGAt                                                                                                                   >  2:479400/1‑109 (MQ=255)
                                               aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGAt                                                                                                                   <  1:479400/109‑1 (MQ=255)
                                               aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 >  1:107684/1‑127 (MQ=255)
                                               aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 <  2:107684/127‑1 (MQ=255)
                                               aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTAt                                                                                     >  1:666324/1‑139 (MQ=255)
                                               aTCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTAt                                                                                     >  1:271690/1‑139 (MQ=255)
                                                 cAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCt                                                                                            >  2:719729/1‑130 (MQ=255)
                                                 cAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCt                                                                                            <  1:719729/130‑1 (MQ=255)
                                                   ggTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGAt                                                                                                                                >  1:393351/1‑92 (MQ=255)
                                                   ggTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGAt                                                                                                                                <  2:393351/92‑1 (MQ=255)
                                                       aaaGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCa                                                                                                  <  2:7784/118‑1 (MQ=255)
                                                       aaaGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCa                                                                                                  >  1:7784/1‑118 (MQ=255)
                                                       aaaGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGaaa                                                                             <  2:271690/139‑1 (MQ=255)
                                                              ataAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGa                                                                                  <  2:739381/127‑1 (MQ=255)
                                                              ataAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGa                                                                                  >  1:739381/1‑127 (MQ=255)
                                                               taAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAg                                                                     >  1:334406/1‑139 (MQ=255)
                                                                  aTCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGaaa                                                                             <  2:302509/128‑1 (MQ=255)
                                                                  aTCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGaaa                                                                             >  1:302509/1‑128 (MQ=255)
                                                                     ctctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                <  2:458427/74‑1 (MQ=255)
                                                                     ctctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                >  1:458427/1‑74 (MQ=255)
                                                                       ctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATc                                                                                                                               <  1:571865/73‑1 (MQ=255)
                                                                       ctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATc                                                                                                                               >  2:571865/1‑73 (MQ=255)
                                                                       ctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTcgc                                                             >  1:345627/1‑139 (MQ=255)
                                                                       ctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTcgc                                                             >  1:838742/1‑139 (MQ=255)
                                                                       ctTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTcgc                                                             >  1:802442/1‑139 (MQ=255)
                                                                              cgcgATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTc                                                                                                               <  2:218339/82‑1 (MQ=255)
                                                                              cgcgATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTc                                                                                                               >  1:218339/1‑82 (MQ=255)
                                                                              cgcgATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGgcg                                                      >  2:356012/1‑139 (MQ=255)
                                                                               gcgATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGAt                                                                                                                   <  1:717712/77‑1 (MQ=255)
                                                                               gcgATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGAt                                                                                                                   >  2:717712/1‑77 (MQ=255)
                                                                                       taCCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGAt                                                                                                                                >  1:106217/1‑56 (MQ=255)
                                                                                       taCCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGAt                                                                                                                                <  2:106217/56‑1 (MQ=255)
                                                                                           gccgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATggggg                                         >  2:447909/1‑139 (MQ=255)
                                                                                             cgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCa                                                                                                  <  1:666076/80‑1 (MQ=255)
                                                                                             cgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCa                                                                                                  >  2:666076/1‑80 (MQ=255)
                                                                                             cgTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCa                                       >  1:116099/1‑139 (MQ=255)
                                                                                               tCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCtt                                                                                           <  2:30393/85‑1 (MQ=255)
                                                                                               tCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCtt                                                                                           >  1:30393/1‑85 (MQ=255)
                                                                                               tCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAAc                                     >  2:293379/1‑139 (MQ=255)
                                                                                               tCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTg                                                         <  2:722337/119‑1 (MQ=255)
                                                                                               tCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTg                                                         >  1:722337/1‑119 (MQ=255)
                                                                                                 accacTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCa                                   >  1:242378/1‑139 (MQ=255)
                                                                                                    acTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCa                                                                                                       <  1:380849/68‑1 (MQ=255)
                                                                                                    acTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCa                                                                                                       >  2:380849/1‑68 (MQ=255)
                                                                                                    acTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTg                                                                        <  2:588564/99‑1 (MQ=255)
                                                                                                    acTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTg                                                                        >  1:588564/1‑99 (MQ=255)
                                                                                                      tCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGc                                                                                             <  1:105961/76‑1 (MQ=255)
                                                                                                      tCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGc                                                                                             >  2:105961/1‑76 (MQ=255)
                                                                                                      tCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                <  1:59639/41‑1 (MQ=255)
                                                                                                      tCACCGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGAt                                                                                                                                >  2:59639/1‑41 (MQ=255)
                                                                                                         ccGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGAc                           <  2:242378/139‑1 (MQ=255)
                                                                                                         ccGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGAc                           <  2:345627/139‑1 (MQ=255)
                                                                                                          cGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 >  2:135667/1‑68 (MQ=255)
                                                                                                          cGCCAGCCGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 <  1:135667/68‑1 (MQ=255)
                                                                                                             cAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCg                       >  2:61835/1‑139 (MQ=255)
                                                                                                                ccGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 >  2:576850/1‑62 (MQ=255)
                                                                                                                ccGTGCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCAt                                                                                                 <  1:576850/62‑1 (MQ=255)
                                                                                                                  gTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAAt                  <  1:447909/139‑1 (MQ=255)
                                                                                                                    gCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGa                                                                                  >  1:255445/1‑73 (MQ=255)
                                                                                                                    gCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGa                                                                                  <  2:255445/73‑1 (MQ=255)
                                                                                                                    gCCGCATGAAGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATAc                >  1:654615/1‑139 (MQ=255)
                                                                                                                            aaGCTGGTGCGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCa        <  2:654615/139‑1 (MQ=255)
                                                                                                                                  gtgtGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCAcc  >  1:660057/1‑139 (MQ=255)
                                                                                                                                    gtgCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGgcg                                                      >  2:475681/1‑85 (MQ=255)
                                                                                                                                    gtgCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGgcg                                                      <  1:475681/85‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                       
TACTGTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACC  >  NC_000913/3647348‑3647616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑