| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,024,703 | A→G | Q78R (CAG→CGG) | helD → | DNA helicase IV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,024,703 | 0 | A | G | 100.0% | 98.3 / NA | 28 | Q78R (CAG→CGG) | helD | DNA helicase IV |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (17/11); total (17/11) | |||||||||||
TTCAATCAATTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCAGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGACGCGTG > NC_000913/1024588‑1024837 | ttCAATCAATTACTGGCGATTGACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTACACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATg > 2:505064/1‑139 (MQ=255)ttCAATCAATTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATg > 1:784127/1‑139 (MQ=255) tcaatTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCAc > 1:841415/1‑139 (MQ=255) tGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGgcggcg < 2:841415/139‑1 (MQ=255) gCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGt > 2:314804/1‑139 (MQ=255) aGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGAt > 1:378497/1‑139 (MQ=255) cgcgGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGgcggcg > 1:251754/1‑122 (MQ=255) cgcgGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGgcggcg < 2:251754/122‑1 (MQ=255) ggTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCg < 2:658740/134‑1 (MQ=255) ggTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCg > 1:658740/1‑134 (MQ=255) gTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTggc < 2:807500/109‑1 (MQ=255) gTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTggc > 1:807500/1‑109 (MQ=255) tGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGa > 1:367713/1‑115 (MQ=255) tGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGa < 2:367713/115‑1 (MQ=255) ggggCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTc < 2:784127/139‑1 (MQ=255) ggCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGa > 1:465357/1‑92 (MQ=255) ggCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGa < 2:465357/92‑1 (MQ=255) ggCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTg > 1:40684/1‑139 (MQ=255) ggCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTg > 1:782147/1‑139 (MQ=255) aGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGc > 2:484728/1‑69 (MQ=255) aGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGttt > 2:512997/1‑73 (MQ=255) aGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCGGCGttt < 1:512997/73‑1 (MQ=255) cACGGCACCGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTgggg < 2:782147/139‑1 (MQ=255) cGAATGGGGCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAaaataaa < 1:513208/139‑1 (MQ=255) ggCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGgcggcg > 2:349680/1‑47 (MQ=255) ggCGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGgcggcg < 1:349680/47‑1 (MQ=255) cGAGACGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGAcg > 1:421783/1‑139 (MQ=255) aCGCGGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGACGCGTg > 1:123236/1‑139 (MQ=255) cgcgGCGTTTTTACCATCATCTTGATGCTCACTgg < 2:523117/35‑1 (MQ=255) | TTCAATCAATTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCAGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGACGCGTG > NC_000913/1024588‑1024837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |