| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,218,365 | C→T | E238K (GAG→AAG) | aer ← | fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,218,365 | 0 | C | T | 100.0% | 119.9 / NA | 38 | E238K (GAG→AAG) | aer | fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (16/22); total (16/22) | |||||||||||
TTCAGTTCATCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTCATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCACTAACGCAC > NC_000913/3218232‑3218499 | ttcagttcaTCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGc < 1:699498/139‑1 (MQ=255)ttcagttcaTCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGc > 1:696426/1‑139 (MQ=255) cagttcaTCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTg < 2:186559/139‑1 (MQ=255) ttcaTCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGa > 1:229733/1‑139 (MQ=255) ttcaTCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGa < 2:229733/139‑1 (MQ=255) ccTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCt < 2:29236/139‑1 (MQ=255) ttCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCaa < 2:592706/139‑1 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTACTGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTg > 2:490681/1‑139 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCaa < 1:268066/106‑1 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCaa > 2:268066/1‑106 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAaca < 2:579983/108‑1 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAaca > 1:579983/1‑108 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTg > 1:740575/1‑139 (MQ=255) gACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTg > 1:627968/1‑139 (MQ=255) ttGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCgg < 2:6722/114‑1 (MQ=255) ttGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCgg > 1:6722/1‑114 (MQ=255) cGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCgg < 1:123531/105‑1 (MQ=255) cGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCgg > 2:123531/1‑105 (MQ=255) acaTCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTg < 1:490681/139‑1 (MQ=255) aTCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGcc > 2:801643/1‑139 (MQ=255) cAAGTTGCCCTACCGCACGTAATTTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGt < 1:520172/92‑1 (MQ=255) cAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGt > 2:520172/1‑92 (MQ=255) ccTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGgcgc < 2:627968/139‑1 (MQ=255) ccTACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGgcgc > 2:601785/1‑139 (MQ=255) tACCGCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCtt < 1:630636/139‑1 (MQ=255) gCACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCca < 2:696426/139‑1 (MQ=255) cACGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCcaa > 2:768816/1‑139 (MQ=255) cGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCtt < 2:562115/71‑1 (MQ=255) cGTAATGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCtt > 1:562115/1‑71 (MQ=255) tGTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATAcc > 1:488353/1‑139 (MQ=255) gTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCa < 2:740575/139‑1 (MQ=255) gTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCa < 1:601785/139‑1 (MQ=255) gTCAGCCCCAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCa < 1:768816/139‑1 (MQ=255) cccAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCACTAACg < 2:488353/139‑1 (MQ=255) cccAGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCACTAACg < 1:107270/139‑1 (MQ=255) aGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAgg > 1:34006/1‑112 (MQ=255) aGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAgg < 2:34006/112‑1 (MQ=255) aGCTTATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCACTAACGcac < 1:801643/139‑1 (MQ=255) | TTCAGTTCATCGGTGCCTTTCGCCAGCGTCTCACTGCCATTTCTGACACTGGACACCTGGCTTGAGACATCGTTAATTAGCCAACGGCACATCAGGCCAAGTTGCCCTACCGCACGTAATGTCAGCCCCAGCTCATCGCTGCGATTCAGATGCTCAACACTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTCTATCGGGCGCACAATCTGCCATTCAAAACAGGCGCTTGCCAACAATACCACTAACGCAC > NC_000913/3218232‑3218499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |