Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,782,393 (C)5→4 coding (334/4581 nt) ypjA ← adhesin‑like autotransporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,782,3890C.100.0% 298.4 / NA 70coding (338/4581 nt)ypjAadhesin‑like autotransporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (34/36);  total (34/36)

CCACCATCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACA  >  NC_000913/2782254‑2782523
                                                                                                                                       |                                                                                                                                      
ccaccaTCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAcccc                                                                                                                                     >  2:983313/1‑139 (MQ=255)
  accaTCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAccccgt                                                                                                                                   >  2:617503/1‑137 (MQ=255)
   ccaTCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAccccgtc                                                                                                                                  <  2:574588/139‑4 (MQ=255)
      tCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATg                                                                                                                              >  2:569998/1‑139 (MQ=255)
      tCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATg                                                                                                                              >  1:93099/1‑139 (MQ=255)
           gAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAccccgt                                                                                                                                   <  1:288342/130‑3 (MQ=255)
           gAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAccccgt                                                                                                                                   >  2:288342/1‑128 (MQ=255)
            aGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGa                                                                                                                        <  1:933264/139‑1 (MQ=255)
                 tCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTc                                                                                                                   >  2:68533/1‑139 (MQ=255)
                      tCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAcc                                                                                                                                       >  2:311826/1‑115 (MQ=255)
                      tCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATAcc                                                                                                                                       <  1:311826/115‑1 (MQ=255)
                      tCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCa                                                                                                              <  1:221876/139‑1 (MQ=255)
                      tCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCa                                                                                                              >  2:874401/1‑139 (MQ=255)
                             ccctccctCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACTCCGTCATGAATTGACTGTCTGCCACCGTTaa                                                                                                       <  1:815190/139‑1 (MQ=255)
                                  cctcTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGtt                                                                                                  <  2:93099/139‑1 (MQ=255)
                                  cctcTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGtt                                                                                                  <  2:309625/139‑1 (MQ=255)
                                  cctcTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGtt                                                                                                  <  1:569998/139‑1 (MQ=255)
                                   ctctACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTg                                                                                                 <  1:617503/139‑1 (MQ=255)
                                   ctctACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTg                                                                                                 <  1:941827/139‑1 (MQ=255)
                                     ctACGCGTGAACCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGta                                                                                               <  2:655268/139‑1 (MQ=255)
                                        cgcgTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGtatta                                                                                            >  1:376999/1‑139 (MQ=255)
                                        cgcgTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGtatta                                                                                            >  2:246126/1‑139 (MQ=255)
                                        cgcgTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGtatta                                                                                            >  1:915410/1‑139 (MQ=255)
                                         gcgTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGtattat                                                                                           >  2:385251/1‑139 (MQ=255)
                                            tGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAg                                                                                        >  1:203457/1‑139 (MQ=255)
                                              aaGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGcc                                                                                      >  2:171730/1‑139 (MQ=255)
                                              aaGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGcc                                                                                      >  1:316774/1‑139 (MQ=255)
                                              aaGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGcc                                                                                      >  1:621067/1‑139 (MQ=255)
                                                  aCCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTTATTGCCACTCTCGATTGTCGTACCTGCGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGcc                                                                                  <  2:915410/139‑1 (MQ=255)
                                                         ttAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACaaa                                                                           <  1:346320/139‑1 (MQ=255)
                                                          tAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACaaaa                                                                          >  2:909137/1‑139 (MQ=255)
                                                           aaTTGTCTTTCCATTGCTGATACCGCCTTTATAAACGTCCGGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAAt                                                                         >  2:616751/1‑139 (MQ=255)
                                                                   ttCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGa                                                                 <  2:376999/139‑1 (MQ=255)
                                                                    tCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGAc                                                                <  1:171730/139‑1 (MQ=255)
                                                                    tCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGAc                                                                <  1:983313/139‑1 (MQ=255)
                                                                     ccATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCTCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTGTGACt                                                               >  2:628604/1‑139 (MQ=255)
                                                                     ccATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACt                                                               >  1:518812/1‑139 (MQ=255)
                                                                         tGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCt                                                           <  2:411075/139‑1 (MQ=255)
                                                                         tGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCt                                                           <  1:874401/139‑1 (MQ=255)
                                                                         tGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCt                                                           <  2:316774/139‑1 (MQ=255)
                                                                            tGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCtata                                                        <  2:203457/139‑1 (MQ=255)
                                                                              atacctcaggtatataCTTGCTGAGTGCCACTGGCGATTGTCGTACCTGTGGAAATACTCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAGATTGTTATGACTTCCTATATc                                                      <  1:615367/129‑1 (MQ=255)
                                                                              aTACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTaa                                                                                                       >  1:432623/1‑90 (MQ=255)
                                                                              aTACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTaa                                                                                                       <  2:432623/90‑1 (MQ=255)
                                                                              aTACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATgg                                                                                                    >  1:943557/1‑93 (MQ=255)
                                                                              aTACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATgg                                                                                                    <  2:943557/93‑1 (MQ=255)
                                                                                aCCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTg                                                                                                 >  1:161760/1‑94 (MQ=255)
                                                                                aCCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTg                                                                                                 <  2:161760/94‑1 (MQ=255)
                                                                                     cTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGatat                                               >  1:984779/1‑139 (MQ=255)
                                                                                             aCGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGa                                       <  2:621067/139‑1 (MQ=255)
                                                                                               gTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATccac                                           <  1:448925/133‑1 (MQ=255)
                                                                                               gTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATccac                                           >  2:448925/1‑133 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTa                                                                                                        >  2:323702/1‑71 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTa                                                                                                        <  1:323702/71‑1 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATgg                                                                                                    >  1:644444/1‑75 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATgg                                                                                                    <  2:644444/75‑1 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCcaca                                                                             >  1:563877/1‑98 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCcaca                                                                             <  2:563877/98‑1 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTc                                    >  2:743413/1‑139 (MQ=255)
                                                                                                tCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTc                                    >  2:714634/1‑139 (MQ=255)
                                                                                                 ccTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCa                                                                                                              >  1:883591/1‑64 (MQ=255)
                                                                                                 ccTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCa                                                                                                              <  2:883591/64‑1 (MQ=255)
                                                                                                 ccTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTaa                                                                                                       >  2:236780/1‑71 (MQ=255)
                                                                                                 ccTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTaa                                                                                                       <  1:236780/71‑1 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGa                                                                                                                        <  2:904848/53‑1 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGa                                                                                                                        >  1:904848/1‑53 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATg                                                                  >  2:575195/1‑107 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATg                                                                  <  1:575195/107‑1 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGat                                                 >  1:354647/1‑124 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGat                                                 <  2:354647/124‑1 (MQ=255)
                                                                                                  cTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCATGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCaa                                  >  2:667739/1‑139 (MQ=255)
                                                                                                    gATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGa                                                                 >  1:264726/1‑106 (MQ=255)
                                                                                                    gATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGa                                                                 <  2:264726/106‑1 (MQ=255)
                                                                                                                      tCGTACCTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATAcc              <  1:761239/139‑1 (MQ=255)
                                                                                                                           ccTGTGGAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGcc         <  1:909137/139‑1 (MQ=255)
                                                                                                                                 gAAATACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAAc   >  2:896430/1‑139 (MQ=255)
                                                                                                                                  aaaTACCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATGCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACa  <  1:714634/139‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                      
CCACCATCAATGAGTATTCCATTCGCACTCCCTCCCTCTACGCGTGAAGCACCGCCCTTAATTGTCGTTCCATTGCTGATACCCCCTTTATAAACGTCCTGATTGCCACTCTCGATTGTCGTACCTGTGGAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACA  >  NC_000913/2782254‑2782523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: