| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,761,149 | G→A | H215Y (CAT→TAT) | sufD ← | component of SufBCD Fe‑S cluster assembly scaffold |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,761,149 | 0 | G | A | 100.0% | 84.8 / NA | 27 | H215Y (CAT→TAT) | sufD | component of SufBCD Fe‑S cluster assembly scaffold |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (13/14); total (13/14) | |||||||||||
CGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCG > NC_000913/1761015‑1761278 | cGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATAtactgc > 2:269591/1‑139 (MQ=255) gtgtTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCACCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTggg > 1:377127/1‑139 (MQ=255) gTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGc > 2:26782/1‑139 (MQ=255) acTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGt < 1:269591/139‑1 (MQ=255) gcgcCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGa > 1:212857/1‑139 (MQ=255) tgGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAg > 2:999112/1‑96 (MQ=255) tgGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAg < 1:999112/96‑1 (MQ=255) aaTGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAc < 1:26782/139‑1 (MQ=255) cGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGACAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCCGTAAAATGACGAGc < 2:613744/139‑1 (MQ=255) tGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGcccc > 2:78924/1‑121 (MQ=255) tGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGcccc < 1:78924/121‑1 (MQ=255) gCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAc < 2:402697/130‑1 (MQ=255) gCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAc > 1:402697/1‑130 (MQ=255) tCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCa > 1:745005/1‑139 (MQ=255) tCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCa > 2:723488/1‑139 (MQ=255) agccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTg > 1:433670/1‑139 (MQ=255) ccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGAc < 1:376757/139‑1 (MQ=255) cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACa < 2:745005/139‑1 (MQ=255) caacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACaaaa > 2:767707/1‑139 (MQ=255) gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTg < 1:924272/85‑1 (MQ=255) gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTg < 1:908802/85‑1 (MQ=255) gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTg > 2:908802/1‑85 (MQ=255) gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTg > 2:924272/1‑85 (MQ=255) aCTGAGTGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTGGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGAt > 2:529518/1‑120 (MQ=255) aCTGAGCGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGAt < 1:529518/120‑1 (MQ=255) cGGGTTTTCAAACGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGcc < 2:377127/139‑1 (MQ=255) aaaCGCCAGCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccagatccaga < 2:212857/139‑1 (MQ=255) gCTTGATATACTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCg < 1:723488/139‑1 (MQ=255) | CGTACTGGTGTTGTGTCGTAACACTGCGCCACCCAGCAGGAAACTGTGGCTAAATGCGGTGGCATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCG > NC_000913/1761015‑1761278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |