| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,698,231 | T→C | Y107C (TAC→TGC) | pgpC ← | phosphatidylglycerophosphatase C, membrane bound |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,698,231 | 0 | T | C | 100.0% | 71.7 / NA | 22 | Y107C (TAC→TGC) | pgpC | phosphatidylglycerophosphatase C, membrane bound |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/9); total (13/9) | |||||||||||
CCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGTAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCTTCGCTGTGACCAAAAGTGCACC > NC_000913/2698096‑2698345 | ccaccaTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAAcaggcagg > 2:293264/1‑139 (MQ=255) gCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAAt < 1:293264/139‑1 (MQ=255) gCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTc > 2:755920/1‑139 (MQ=255) cTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTcc > 2:638206/1‑139 (MQ=255) aCCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAAt < 1:240018/108‑1 (MQ=255) aCCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAAt > 2:240018/1‑108 (MQ=255) aCCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACAt > 2:74960/1‑139 (MQ=255) ggCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTcgc > 2:1002949/1‑139 (MQ=255) cAGCCAGGACGTATGAAAATAAACCGCTTCCACAAGCGGCTGCGGACAGCCGGTAATCAAACAGATATCAGCATCGGAACTTAACAGGCACGTGGTTAATCGCTCCTGGACCAGCGGAAAGGCGGTAACATTGTCGCGa < 1:638206/139‑1 (MQ=255) cTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCaa > 2:238599/1‑139 (MQ=255) cGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAAAGTGCt > 1:932088/1‑139 (MQ=255) cGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCCCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCt < 1:74960/139‑1 (MQ=255) agCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATc > 1:261151/1‑54 (MQ=255) agCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATc < 2:261151/54‑1 (MQ=255) ccGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCTTCGCtgt > 1:221651/1‑139 (MQ=255) aaTCAACCAGATATCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCTTCGCTGTGACCa < 2:360430/139‑1 (MQ=255) atatCAGCATCGGAACTTAACAGGCAGGTGGTTAAt < 1:882392/36‑1 (MQ=255) atatCAGCATCGGAACTTAACAGGCAGGTGGTTAAt > 2:882392/1‑36 (MQ=255) atatCAGCATCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCTTCGCTGTGACCAAAAGTGCAcc > 1:401477/1‑139 (MQ=255) tCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACAtt < 1:922356/59‑1 (MQ=255) tCGGAACTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACAtt > 2:922356/1‑59 (MQ=255) aaCTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCa > 2:204881/1‑72 (MQ=255) aaCTTAACAGGCAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCa < 1:204881/72‑1 (MQ=255) | CCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGAGAGCCGGTAATCAACCAGATATCAGCATCGGAACTTAACAGGTAGGTGGTTAATCGCTCCTGAACCAGCGGAAAGGCGGTAACATTGTCGCGAAACCAGCGCACGAAATCGGCCTGCAACGTCTGTAAACGTGCTTCGCTGTGACCAAAAGTGCACC > NC_000913/2698096‑2698345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |