| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,031,991 | Δ1 bp | coding (327/1419 nt) | dcm ← | DNA cytosine methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,031,991 | 0 | C | . | 100.0% | 161.9 / NA | 39 | coding (327/1419 nt) | dcm | DNA cytosine methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (23/16); total (23/16) | |||||||||||
ACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGAACTCTTT > NC_000913/2031863‑2032122 | acGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAAt > 2:310066/1‑139 (MQ=255) tGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGa < 1:753132/139‑1 (MQ=255) aGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACg > 2:86060/1‑139 (MQ=255) aGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACg > 2:307648/1‑139 (MQ=255) gcgGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCg < 2:717108/105‑1 (MQ=255) gcgGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCg > 1:717108/1‑105 (MQ=255) cTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCg > 2:392561/1‑139 (MQ=255) tCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGaa < 1:307648/139‑1 (MQ=255) cGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCTCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGc > 2:8009/1‑139 (MQ=255) gTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCg < 1:86060/139‑1 (MQ=255) tGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGgatg > 2:505806/1‑139 (MQ=255) gTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGgatgat > 2:1037461/1‑139 (MQ=255) ggCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATa < 1:91387/103‑1 (MQ=255) ggCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATa > 2:91387/1‑103 (MQ=255) ggCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGAtgtg > 2:658869/1‑139 (MQ=255) ggCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGAtgtg > 1:267502/1‑139 (MQ=255) cTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGaa > 2:925524/1‑99 (MQ=255) cTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGaa < 1:925524/99‑1 (MQ=255) gTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGttt < 1:505806/139‑1 (MQ=255) gCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTgg > 1:718849/1‑139 (MQ=255) cGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCg < 2:559087/83‑1 (MQ=255) cGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCg > 1:559087/1‑83 (MQ=255) tACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGaa < 1:1023268/103‑1 (MQ=255) tACCGCATGTTTGTTCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGaa > 2:1023268/1‑103 (MQ=255) tgttCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGc > 1:928768/1‑139 (MQ=255) ttCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGa > 2:1069579/1‑50 (MQ=38) ttCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGa < 1:1069579/50‑1 (MQ=38) tCCATTCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGa < 1:1037461/139‑1 (MQ=255) ttCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGa < 1:917342/84‑1 (MQ=255) ttCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGa > 2:917342/1‑84 (MQ=255) ttCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATggg > 2:234527/1‑139 (MQ=255) ttCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATggg > 2:1027209/1‑139 (MQ=255) ttCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATggg > 1:447582/1‑139 (MQ=255) tCGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGc > 2:506243/1‑139 (MQ=255) cGCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCg < 1:43850/139‑1 (MQ=255) gCTGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGa > 1:311404/1‑139 (MQ=255) tGGTAAACACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGAAc < 1:785702/139‑1 (MQ=255) aaCACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGAACTCttt < 1:69426/139‑1 (MQ=255) aaCACGCA‑TGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGAACTCttt < 1:310066/139‑1 (MQ=255) | ACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACCGCGACGGATGCCGCCAATTCCGGCGAATAGATCGATAAAGCGAAACGCATAATGCGGATGATGTGCCGGTGGTTTGGGTAATAACGTTTGCAGATGGGCGAACTCTTT > NC_000913/2031863‑2032122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |