| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 788831 = | 0 (0.000) | 35 (0.730) | 25/216 | 0.7 | 94.6% | coding (7/1041 nt) coding (1149/1149 nt) |
galM galK |
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase |
| ? | NC_000913 | 3742633 = | 4 (0.080) | intergenic (‑101/‑100) | yiaJ/yiaK | transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent | |||||
CGCTGCCATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGA > NC_000913/788693‑788961 | ttaaaggctgcttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgt > 1:983413‑M1/139‑139 (MQ=255) ggctgcttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 1:1014141‑M1/134‑139 (MQ=255) ggctgcttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 2:779235‑M1/134‑139 (MQ=255) ggctgcttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 1:275376‑M1/134‑139 (MQ=255) cttttaactgctcagatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTc < 2:206288‑M1/11‑1 (MQ=255) cttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTc < 2:641646‑M1/11‑1 (MQ=255) cttttaactgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTc > 2:448659‑M1/129‑139 (MQ=255) ctgctcaaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTcc < 1:905497‑M1/18‑1 (MQ=255) gAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcg > 2:217095‑M1/1‑121 (MQ=255) gAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcg < 1:614786‑M1/139‑19 (MQ=255) gAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTACGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcg < 1:1073058‑M1/139‑19 (MQ=255) aTACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcg < 1:581783‑M1/139‑21 (MQ=255) aaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 2:686500‑M1/116‑139 (MQ=255) aaatgtcactttcatcccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 1:500726‑M1/116‑139 (MQ=255) gAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggat > 2:2574‑M1/1‑110 (MQ=255) gAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggat > 1:165425‑M1/1‑110 (MQ=255) cccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 2:558575‑M1/101‑106 (MQ=255) cccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa < 1:558575‑M1/6‑1 (MQ=255) cccaggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTa < 1:782329‑M1/39‑1 (MQ=255) ggcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTaaaaa < 1:162026‑M1/43‑1 (MQ=255) cACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcg > 2:185692‑M1/1‑97 (MQ=255) cACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcg < 1:185692‑M1/117‑21 (MQ=255) cACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggatt < 1:197189‑M1/113‑17 (MQ=255) cACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggatt > 2:197189‑M1/1‑97 (MQ=255) gcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa < 1:509080‑M1/24‑1 (MQ=255) gcttccttgtttttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 2:509080‑M1/96‑119 (MQ=255) cAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggat > 2:20340‑M1/1‑92 (MQ=255) cAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggat < 1:20340‑M1/121‑30 (MQ=255) aGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaa < 1:2574‑M1/139‑49 (MQ=255) ttttgatcgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAc > 2:589869‑M1/84‑139 (MQ=255) cgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa < 2:849466‑M1/6‑1 (MQ=255) cgcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCa > 1:849466‑M1/77‑82 (MQ=255) aCTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctg > 2:725870‑M1/1‑77 (MQ=255) gcttttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGttttt > 1:181587‑M1/76‑139 (MQ=255) tttttggcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCt > 1:641646‑M1/73‑139 (MQ=255) tCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcg > 2:272396‑M1/1‑70 (MQ=255) gcttaaaatttcaatatgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCatat > 2:905497‑M1/67‑139 (MQ=255) tGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgtt > 1:9445‑M1/1‑66 (MQ=255) tGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgtt < 2:9445‑M1/130‑65 (MQ=255) gttgttACGCACAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggt < 1:725870‑M1/139‑77 (MQ=255) cAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctggg > 1:189688‑M1/1‑54 (MQ=255) aaaGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggt < 1:272396‑M1/139‑87 (MQ=255) atgcgaaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCt > 2:831411‑M1/52‑139 (MQ=255) aaGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaac > 1:740968‑M1/1‑52 (MQ=255) aaGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaac < 2:740968‑M1/101‑50 (MQ=255) aGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtct > 2:846891‑M1/1‑51 (MQ=255) aGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtct > 2:845545‑M1/1‑51 (MQ=255) aaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCata > 1:728180‑M1/47‑118 (MQ=255) aaacttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCata < 2:728180‑M1/72‑1 (MQ=255) acttgatttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTa > 2:782329‑M1/45‑139 (MQ=255) aGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag < 2:110567‑M1/139‑96 (MQ=255) aGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag < 2:863489‑M1/139‑96 (MQ=255) aGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccag < 2:165425‑M1/139‑96 (MQ=255) atttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa < 2:801630‑M1/24‑1 (MQ=255) atttcaaatatatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 1:801630‑M1/40‑63 (MQ=255) gTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcattt > 1:1051708‑M1/1‑39 (MQ=255) gCTGACCATTGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggttatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgct > 1:195206‑M1/1‑34 (MQ=255) gCTGACCATTGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggttatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgct < 2:195206‑M1/116‑83 (MQ=255) tGACCATCGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataacc < 2:1051708‑M1/139‑108 (MQ=255) tatcgatcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGct > 2:968015‑M1/30‑139 (MQ=255) cGGGTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccata < 2:189688‑M1/139‑115 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa > 2:1028931‑M1/25‑48 (MQ=255) atcactttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGa < 1:1028931‑M1/24‑1 (MQ=255) ggTGCCAGTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaa < 1:846891‑M1/139‑117 (MQ=255) tttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGAt < 2:1091131‑M1/120‑1 (MQ=255) tttttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGAt > 1:206288‑M1/20‑139 (MQ=255) tttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACa > 2:578448‑M1/18‑102 (MQ=255) tttaacaaggcaatctgTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACa < 1:578448‑M1/85‑1 (MQ=255) gTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgct > 2:758233‑M1/1‑16 (MQ=255) gTGCGGGAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgct < 1:758233‑M1/68‑53 (MQ=255) ggAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgc > 2:395836‑M1/1‑11 (MQ=255) ggAGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgc < 1:395836‑M1/56‑46 (MQ=255) aGTTTCGTTtcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaatttacgtacggtgg < 2:914320‑M1/139‑131 (MQ=255) tcgtttcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaatttacgta < 2:606959‑M1/129‑125 (MQ=255) tcgtttcttacactccggattcgcgaaaatggatatcgctgactgcgcgcaaacgctctgctgcctgttctgcggtcaggtctcgctgggtctctgccagcatttcataaccaaccataaatttacgta > 1:606959‑M1/1‑5 (MQ=255) | CGCTGCCATCGGAAAGCGGAATACGGGCGGAAAGTAAAGTCGCACCCCAGTCCATCAGCGTGACTACCATCCCTGCGTTGTTACGCAAAGTTAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGA > NC_000913/788693‑788961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |