| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,265,001 | 1086 bp→GAGG | [prfA] | [prfA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1265001 | 1266086 | 1086 | 32 [0] | [0] 34 | [prfA] | [prfA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1265000 | 0 (0.000) | 32 (0.700) +GAGG |
27/208 | 0.5 | 100% | intergenic (+30/‑12) | hemA/prfA | glutamyl tRNA reductase/peptide chain release factor RF‑1 |
| ? | NC_000913 | 1266087 = | 0 (0.000) | coding (1076/1083 nt) | prfA | peptide chain release factor RF‑1 | |||||
CAGGGGCGCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTAT > NC_000913/1265951‑1266209 | aaccgcttgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggagg > 1:837085‑M2/137‑139 (MQ=255)aaccgcttgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggagg > 2:575633‑M2/137‑139 (MQ=255) ccgcttgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaa < 2:1051633‑M2/5‑1 (MQ=255) ccgcttgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaa < 2:474019‑M2/5‑1 (MQ=255) tgatccatgcgccaacgaaatcacttccacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATg > 2:446280‑M2/130‑139 (MQ=255) gatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg < 1:575633‑M2/11‑1 (MQ=255) gatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg < 1:647462‑M2/11‑1 (MQ=255) atgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAatat < 2:837085‑M2/16‑1 (MQ=255) cgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAAt > 2:942557‑M2/96‑134 (MQ=255) cgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAAt < 1:942557‑M2/39‑1 (MQ=255) cccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg > 2:845958‑M2/94‑104 (MQ=255) cccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg < 1:845958‑M2/11‑1 (MQ=255) cgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACtt < 2:95802‑M2/49‑1 (MQ=255) cgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACtt > 1:95802‑M2/74‑122 (MQ=255) cctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAaca < 1:1093410‑M2/21‑1 (MQ=255) cctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAaca > 2:1093410‑M2/72‑92 (MQ=255) ctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGc > 2:15342‑M2/62‑139 (MQ=255) tgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGaa < 1:388209‑M2/61‑1 (MQ=255) tgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGaa > 2:388209‑M2/61‑121 (MQ=255) cgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAac < 2:990689‑M2/20‑1 (MQ=255) cgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAac > 1:990689‑M2/59‑78 (MQ=255) cgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGa > 2:611441‑M2/59‑139 (MQ=255) cagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGcc < 2:1082948‑M2/44‑1 (MQ=255) cagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGcc > 1:1082948‑M2/54‑97 (MQ=255) cagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATcc < 1:35750‑M2/86‑1 (MQ=255) cctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCctgc > 1:537421‑M2/51‑139 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGt < 2:537421‑M2/99‑1 (MQ=255) gtaaatcattttttttttttgcagggtggaggAAGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCa < 1:645162‑M2/107‑1 (MQ=255) ttttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGt > 1:276571‑M2/25‑139 (MQ=255) tctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGc > 1:967525‑M2/22‑116 (MQ=255) tctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGc < 2:967525‑M2/95‑1 (MQ=255) ttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTAt > 2:790953‑M2/17‑139 (MQ=255) aggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGcc > 1:903504‑M2/4‑47 (MQ=255) aggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGcc < 2:903504‑M2/44‑1 (MQ=255) | CAGGGGCGCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTAT > NC_000913/1265951‑1266209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |