| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 828,477 | C→T | V169I (GTT→ATT) | ybhF ← | putative ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 828,477 | 0 | C | T | 100.0% | 131.6 / NA | 41 | V169I (GTT→ATT) | ybhF | putative ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (20/21); total (20/21) | |||||||||||
CGCCTTCGTTCATCAGTAACACGTCACGGCACTGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAACGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGCCCAAGAG > NC_000913/828342‑828602 | cGCCTTCGTTCATCAGTAACACGTCACGGCACTGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAatgcc > 1:952297/1‑139 (MQ=255) cacGTCACGGCACTGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGagc < 2:941894/139‑1 (MQ=255) cGTCACGGCACTGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGagcag > 2:911782/1‑139 (MQ=255) tGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCg > 1:579374/1‑139 (MQ=255) cTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGt > 2:589576/1‑139 (MQ=255) cTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGt > 2:198045/1‑139 (MQ=255) cTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGt > 1:857818/1‑139 (MQ=255) tcgAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca < 1:198045/139‑1 (MQ=255) tcgAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca < 2:579374/139‑1 (MQ=255) tcgAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca < 1:911782/139‑1 (MQ=255) tcgAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca < 1:838274/139‑1 (MQ=255) gaTACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGt < 2:99032/139‑1 (MQ=255) ggATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGttt > 1:828883/1‑139 (MQ=255) gATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGtttt > 1:929004/1‑139 (MQ=255) tAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGagcagc < 1:359908/91‑1 (MQ=255) tAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGagcagc > 2:359908/1‑91 (MQ=255) tAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGcc < 1:836738/108‑1 (MQ=255) tAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGcc > 2:836738/1‑108 (MQ=255) aCATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGttt < 2:465622/139‑1 (MQ=255) aCATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGttt > 2:813590/1‑139 (MQ=255) aCATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGttt > 1:465622/1‑139 (MQ=255) aTCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCTAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCa < 1:813590/139‑1 (MQ=255) tCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccac > 1:520971/1‑101 (MQ=255) tCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccac < 2:520971/101‑1 (MQ=255) cgcccgccAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGt < 2:129428/68‑1 (MQ=255) cgcccgccAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGt > 1:129428/1‑68 (MQ=255) ccgccAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGga > 1:541093/1‑139 (MQ=255) cATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAgg > 1:228934/1‑139 (MQ=255) aTCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGt > 2:832980/1‑72 (MQ=255) aTCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGt < 1:832980/72‑1 (MQ=255) aTCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca > 1:1050138/1‑82 (MQ=255) aTCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCccacca < 2:1050138/82‑1 (MQ=255) tCTGCCACAGTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCg > 1:596998/1‑139 (MQ=255) gTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTaaa < 2:268741/139‑1 (MQ=255) gTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTaaa < 2:840861/139‑1 (MQ=255) gTTCGCGCCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTaaa < 2:857818/139‑1 (MQ=255) cgcCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGcc < 1:412698/139‑1 (MQ=255) cgcCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGcc > 2:412698/1‑139 (MQ=255) cgcCGTGAGATAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGcc < 2:929004/139‑1 (MQ=255) gagaTAGGGTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGCCCAagag < 1:639058/139‑1 (MQ=255) ggTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCg > 2:430882/1‑42 (MQ=255) ggTCAATGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCg < 1:430882/42‑1 (MQ=255) | CGCCTTCGTTCATCAGTAACACGTCACGGCACTGCTCGGCTTCGTCGAGATACGAGGTACTCCAGAGGATTAACATCCCTTCGCCCGCCAGCTCATGCACCATCTGCCACAGTTCGCGCCGTGAGATAGGGTCAACGCCGACGCCGGGTTCATCGAGCAGCAACACTTTCGGTTCGCCCACCAGGGTACAGGCCAGACCGAGTTTTTGTTTCATCCCACCGGAGAGCTTGCCCGCCAGGCGTCCGGTAAACGGCCCAAGAG > NC_000913/828342‑828602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |