| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,562 | (G)6→7 | coding (126/1815 nt) | yjgL → | SopA‑central‑domain‑like hexapeptide repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,556 | 1 | . | G | 98.5% | 230.5 / ‑3.5 | 66 | coding (120/1815 nt) | yjgL | SopA‑central‑domain‑like hexapeptide repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (35/30); total (36/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.47e-01 | |||||||||||
CTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCAT > NC_000913/4475422‑4475688 | cTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑gggg > 2:1021138/1‑139 (MQ=255) tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg < 1:394120/139‑1 (MQ=255) tCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 1:267459/1‑139 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:402572/139‑2 (MQ=255) aaGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:297061/139‑2 (MQ=255) ttCGTCATGAGCAAAATGTCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACTAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg > 2:918003/1‑132 (MQ=255) ttCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:918003/133‑2 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATaa > 2:1093420/1‑139 (MQ=255) cGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATaa > 1:806836/1‑139 (MQ=255) cATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAg < 2:1173008/139‑1 (MQ=255) cATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAg < 2:674859/139‑1 (MQ=255) cATGAGCAAAACATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAg < 2:962772/139‑1 (MQ=255) aTGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGa > 2:993032/1‑139 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAg > 2:81089/1‑139 (MQ=255) gAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAg < 2:806836/139‑1 (MQ=255) atCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGATGGAATAttct < 1:1021138/139‑1 (MQ=255) aGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACATGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg > 1:563313/1‑111 (MQ=255) aGATTTAAAGTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggg < 2:563313/111‑1 (MQ=255) ttAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCt > 1:501737/1‑139 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGTCG‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 1:544849/1‑139 (MQ=255) ttCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCAtt > 1:552916/1‑139 (MQ=255) ctcAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg > 2:1433659/1‑98 (MQ=255) ctcAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:1433659/99‑2 (MQ=255) aaCACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt > 2:328447/1‑102 (MQ=255) aaCACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGAt < 1:328447/102‑1 (MQ=255) aaCACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTag > 1:1475540/1‑139 (MQ=255) aaCACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTag > 2:405062/1‑139 (MQ=255) tacattaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGttttt > 2:185176/1‑139 (MQ=255) attaGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGc > 2:1054196/1‑139 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat < 1:557219/102‑1 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat > 2:557219/1‑102 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 2:466539/1‑139 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 2:798242/1‑139 (MQ=255) taGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 1:232025/1‑139 (MQ=255) aGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:239923/139‑1 (MQ=255) gCCAACAATTTTAAACAAAAGAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTGAGAGTTTTTGGCAAAg > 2:999886/1‑139 (MQ=255) ctgACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGGTAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGa > 2:319004/3‑139 (MQ=255) ccGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat < 1:182139/99‑1 (MQ=255) ccGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAat > 2:182139/1‑99 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa > 2:488477/1‑134 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaa < 1:488477/134‑1 (MQ=255) gACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGata > 1:436732/1‑139 (MQ=255) aCAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:185176/139‑1 (MQ=255) aCAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:466539/139‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:478916/133‑1 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:478916/1‑133 (MQ=255) cAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATAtt > 2:341872/1‑139 (MQ=255) gAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGAt < 1:1093420/139‑1 (MQ=255) aGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGAttt > 1:428222/1‑139 (MQ=255) aaTACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCaaa < 2:428222/139‑1 (MQ=255) tACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACg < 2:267459/139‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCt > 2:1370709/1‑112 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCt < 1:1370709/112‑1 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 2:1158801/44‑2 (MQ=255) cTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg > 1:1158801/1‑43 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:1433666/98‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:883554/1‑98 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 2:883554/98‑1 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 1:1433666/1‑98 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCa > 1:820910/1‑139 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg > 2:994112/1‑41 (MQ=255) ggCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑ggggggg < 1:994112/42‑2 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa < 1:1224011/91‑1 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCa > 2:1224011/1‑91 (MQ=255) gtTGGAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGaa < 1:993032/139‑1 (MQ=255) ggAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGa < 1:59011/50‑1 (MQ=255) ggAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGa > 2:59011/1‑50 (MQ=255) ggAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAg < 1:1136784/68‑1 (MQ=255) ggAATGAATGATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAg > 2:1136784/1‑68 (MQ=255) aatgaatgATTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCggg < 1:745640/139‑1 (MQ=255) aatgaTTTTGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGa > 2:12480/1‑139 (MQ=255) tttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa > 2:578380/1‑78 (MQ=255) tttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCaaa < 1:578380/78‑1 (MQ=255) tttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatg > 1:1376099/1‑139 (MQ=255) tttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatg < 1:999886/139‑1 (MQ=255) ttGCCCGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATatga < 2:1475540/139‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat > 2:773597/1‑79 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGatat < 1:773597/79‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 1:798242/139‑1 (MQ=255) cccGTATTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATAATTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATgg < 1:1440575/139‑1 (MQ=255) aTTG‑CCGGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCat > 2:70805/1‑139 (MQ=255) | CTCAAGGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTG‑CC‑GGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCAT > NC_000913/4475422‑4475688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |