| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,101,039 | (C)7→10 | coding (585/720 nt) | yggN ← | DUF2884 family putative periplasmic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3101032 | 3 (0.050) | 44 (0.740) +CCC |
36/192 | 0.3 | 93.6% | coding (592/720 nt) | yggN | DUF2884 family putative periplasmic protein |
| ? | NC_000913 | 3101033 = | 3 (0.050) | coding (591/720 nt) | yggN | DUF2884 family putative periplasmic protein | |||||
TAGAGGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCG > NC_000913/3100897‑3101167 | tAGAGGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccc < 1:861982‑M1/139‑4 (MQ=255) gagGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGGGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccc > 1:947178‑M1/1‑134 (MQ=255) gagGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGGTTTCAGccccc > 2:961764‑M1/1‑134 (MQ=255) gagGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccc > 1:594643‑M1/1‑134 (MQ=255) ttttAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccagg < 2:1133601‑M1/139‑14 (MQ=255) tttAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGcccccccccccagg < 2:1014231‑M1/139‑15 (MQ=255) aaTTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcc > 2:1293518‑M1/1‑121 (MQ=255) aaTTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcc > 1:401489‑M1/1‑121 (MQ=255) aaTTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggc < 2:1195490‑M1/135‑15 (MQ=255) aaTTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggc > 1:1195490‑M1/1‑121 (MQ=255) ccGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACCTCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagca < 1:104837‑M1/139‑24 (MQ=255) ccGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagca < 1:1293518‑M1/139‑24 (MQ=255) ccGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttc > 2:236308‑M1/1‑116 (MQ=255) ccGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttc < 1:236308‑M1/133‑18 (MQ=255) ggCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGcccccccc > 2:852833‑M1/1‑108 (MQ=255) ggCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTCCAG‑cccccgcc < 1:852833/116‑4 (MQ=255) tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTACCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGcccccccc < 2:1165935‑M1/111‑9 (MQ=255) tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTACCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGcccccccc > 1:1165935‑M1/1‑103 (MQ=255) cTATCTTCCAGAGTCACAACGCGGCTACAAACCTCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacat < 1:170932‑M1/124‑27 (MQ=255) cTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacat > 2:170932‑M1/1‑98 (MQ=255) tCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGcccccccccccaggcttcccagcacattctgtaatgggttaccgccg < 1:961764‑M1/139‑48 (MQ=255) tCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcag > 1:849499‑M1/1‑85 (MQ=255) tCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgctttccag > 2:1435108‑M1/1‑85 (MQ=255) acaACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattc < 1:108787‑M1/111‑29 (MQ=255) acaACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattc > 2:108787‑M1/1‑83 (MQ=255) aCGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccg < 2:41031‑M1/139‑60 (MQ=255) cgGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccag > 1:29682‑M1/1‑77 (MQ=255) cgGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccag < 2:29682‑M1/98‑22 (MQ=255) gCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttc > 1:1442232‑M1/1‑75 (MQ=255) aCAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcg < 2:849499‑M1/139‑68 (MQ=255) ttGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcat < 2:594643‑M1/139‑78 (MQ=255) ttGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcat < 2:1442232‑M1/139‑78 (MQ=255) tGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGctccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcatt > 2:775663‑M1/1‑61 (MQ=255) ccAAACTGCTGGAATTCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGacccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaa < 2:947178‑M1/139‑81 (MQ=255) aCTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatgct > 1:193102‑M1/1‑55 (MQ=255) ctgGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatg < 1:1371000‑M1/133‑83 (MQ=255) ctgGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatg > 2:1371000‑M1/1‑51 (MQ=255) cTTTTTCCACTCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatgctgtcctgtaaaattccacccatt < 2:401489‑M1/139‑107 (MQ=255) tCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatg > 2:766803‑M1/1‑23 (MQ=255) tCGGTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatg < 1:766803‑M1/105‑83 (MQ=255) tCGGTTTGGATTGAGGATTGCAGCCCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCa > 2:664413/1‑125 (MQ=255) tCGGTTTGGATTGAGGATTGCAGCCCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCa < 1:664413/125‑1 (MQ=255) ggTTTGGATTGAGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatgctgtcctgtaaaattccacccattgcctgattcact < 1:19593‑M1/139‑119 (MQ=255) gAGGATTGCAGccccccccccaggcttcccagcacatt < 2:561018‑M1/38‑28 (MQ=255) gAGGATTGCAGccccccccccaggcttcccagcacatt > 1:561018‑M1/1‑11 (MQ=255) aGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccg < 1:954050‑M1/69‑60 (MQ=255) aGGATTGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccg > 2:954050‑M1/1‑10 (MQ=255) tGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgc > 2:539963‑M1/1‑5 (MQ=255) tGCAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgc < 1:539963‑M1/71‑67 (MQ=255) cAGctccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcgcccatttcattaatgctgtcctgtaaaattccacccattgcctgattcactaattgctggccttcggcg < 1:775663‑M1/139‑137 (MQ=255) cAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcg > 2:268226‑M1/1‑3 (MQ=255) cAGccccccccccaggcttcccagcacattctgtaatgggttaccgccgcttttcagcaccgctttcgcg < 1:268226‑M1/70‑68 (MQ=255) | TAGAGGATTATTTTAAATTCCCGACCAGGGCTTTGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCG > NC_000913/3100897‑3101167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |