| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,757,753 | Δ5 bp | coding (969‑973/1005 nt) | ldtE ← | murein L,D‑transpeptidase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1757753 | 1757757 | 5 | 57 [0] | [0] 57 | ldtE | murein L,D‑transpeptidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1757752 | 0 (0.000) | 57 (0.940) | 37/210 | 0.4 | 100% | coding (974/1005 nt) | ldtE | murein L,D‑transpeptidase |
| ? | NC_000913 | 1757758 = | 0 (0.000) | coding (968/1005 nt) | ldtE | murein L,D‑transpeptidase | |||||
TGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTT > NC_000913/1757626‑1757893 | gcgtctggacaacatgactactaaataccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCAt > 2:531034‑M2/133‑139 (MQ=255) acaacatggctactaaataccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt < 1:1327133‑M2/15‑1 (MQ=255) ccgcaagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCCCCATTCTGCGCTGACTCTACTGAAGGCGCAt > 1:26554‑M2/106‑139 (MQ=255) caagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgc > 2:403105‑M2/103‑139 (MQ=255) caagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgc > 1:728824‑M2/103‑139 (MQ=255) caagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgc > 1:276542‑M2/103‑139 (MQ=255) aagtaatagtacctgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgct > 1:1280588‑M2/102‑139 (MQ=255) ctctgaagtgataaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGt > 1:851928‑M2/90‑139 (MQ=255) tgtgaagtgcaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGtt > 2:986142‑M2/89‑139 (MQ=255) tgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc > 2:91564‑M2/89‑100 (MQ=255) tgtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc < 1:91564‑M2/12‑1 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgcg > 2:435317‑M2/88‑100 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgcg < 1:435317‑M2/13‑1 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt > 2:1367170‑M2/88‑102 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCt < 1:1367170‑M2/15‑1 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTg < 2:1128233‑M2/52‑1 (MQ=255) gtgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTg > 1:703983‑M2/88‑139 (MQ=255) tgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc > 1:1325390‑M2/87‑98 (MQ=255) tgaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc < 2:1325390‑M2/12‑1 (MQ=255) gaagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccctgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCt > 1:148543‑M2/86‑139 (MQ=255) aagtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttacctttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTc > 2:43531‑M2/85‑139 (MQ=255) gtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgcgc > 1:116889‑M2/83‑96 (MQ=255) gtgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgcgc < 2:116889‑M2/14‑1 (MQ=255) tgaaaaatggcgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCAc > 2:416565‑M2/82‑139 (MQ=255) cgcacattgtgcgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGa < 1:43531‑M2/68‑1 (MQ=255) cgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCa < 2:787919‑M2/3‑1 (MQ=255) cgccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCa > 1:787919‑M2/61‑63 (MQ=255) gccattttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATAccc < 1:1327565‑M2/80‑1 (MQ=255) tttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc > 1:730384‑M2/55‑66 (MQ=255) tttttttgtctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTgc < 2:730384‑M2/12‑1 (MQ=255) ctgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACa > 2:1204883‑M2/46‑139 (MQ=255) tgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATAcc < 2:1152874‑M2/79‑1 (MQ=255) tgccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATAcc > 1:1152874‑M2/45‑123 (MQ=255) ccgtttaccgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACg > 2:614164‑M2/43‑139 (MQ=255) accgttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTAt < 2:276542‑M2/103‑1 (MQ=255) ttactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGAc > 2:1254358‑M2/33‑139 (MQ=255) tactgcgtcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACt < 2:766869‑M2/108‑1 (MQ=255) tcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCt < 2:148543‑M2/115‑1 (MQ=255) tcacgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTACACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCt > 1:761074‑M2/25‑139 (MQ=255) cgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgct < 1:1278823‑M2/38‑1 (MQ=255) cgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTgct > 2:1278823‑M2/22‑59 (MQ=255) cgcgtaacatattcccttgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGAt > 2:1398393‑M2/22‑139 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGaa < 2:528097‑M2/69‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGaa > 1:528097‑M2/5‑73 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTa < 1:979558‑M2/102‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTa > 2:979558‑M2/5‑106 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTa > 2:1225288‑M2/5‑125 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTa < 1:1225288‑M2/121‑1 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCt > 2:1463417‑M2/5‑139 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCt > 1:759013‑M2/5‑139 (MQ=255) tgctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCt > 2:87762‑M2/5‑139 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGa < 2:470209‑M2/106‑1 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGa > 1:1057632‑M2/4‑109 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGa < 2:1057632‑M2/106‑1 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGa > 1:470209‑M2/4‑109 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCtt > 1:637391‑M2/4‑139 (MQ=255) gctTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCtt > 2:534701‑M2/4‑139 (MQ=255) | TGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTT > NC_000913/1757626‑1757893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |