| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,240,984 | (G)7→10 | coding (1041/1245 nt) | sstT → | sodium:serine/threonine symporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3240977 | 0 (0.000) | 41 (1.060) +GGG |
31/194 | 0.2 | 100% | coding (1034/1245 nt) | sstT | sodium:serine/threonine symporter |
| ? | NC_000913 | 3240978 = | 0 (0.000) | coding (1035/1245 nt) | sstT | sodium:serine/threonine symporter | |||||
GGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCT > NC_000913/3240847‑3241110 | ggcgCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggggg > 2:687865‑M1/1‑131 (MQ=255) tACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggcccctgctgctgatc > 1:122003‑M1/1‑114 (MQ=255) ccGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatccc > 1:41240‑M1/1‑112 (MQ=255) tgtTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact < 2:888606‑M1/139‑31 (MQ=255) tgtTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact < 2:41240‑M1/139‑31 (MQ=255) ttGACGCTGGCTTCGGTTAATACCCTGGGTATTCCGGTCGATCTTCCCCCGGGGCTGGTGTTGGGCGTGGGGGGTTCTCTGTGTTCCTGTGGCGCATCCGGCGGGGCggggggggggtctctgctgctgatcccactgg < 1:845870‑M1/139‑33 (MQ=255) ttGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact > 1:129620‑M1/1‑107 (MQ=255) ttGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact < 2:129620‑M1/137‑31 (MQ=255) tGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggc < 2:123027‑M1/139‑34 (MQ=255) gACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccccgggcc > 2:845870‑M1/1‑105 (MQ=255) ggctgCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggggggtctctgctgctgatcccactagcctggcact > 1:830700‑M1/1‑99 (MQ=255) gctgCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCGGGGGCGCATCCGGCGGGGCgggggggggggtctctgctgctgatcccactggcctgtaat < 1:687865‑M1/139‑42 (MQ=255) aTACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGTGCATCCGGCGTGGCgggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatt > 2:200413‑M1/1‑88 (MQ=255) cGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcg < 1:332035‑M1/139‑55 (MQ=255) gCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcg < 2:99953‑M1/139‑56 (MQ=255) gggTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatccca > 1:438017‑M1/1‑81 (MQ=255) gggTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatccca < 2:438017‑M1/109‑29 (MQ=255) aTTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGGGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgata < 2:286571‑M1/139‑63 (MQ=255) tCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact > 2:761439‑M1/1‑70 (MQ=255) tCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact < 1:761439‑M1/100‑31 (MQ=255) tCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggg > 1:626401‑M1/1‑70 (MQ=255) tCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggg < 2:626401‑M1/76‑7 (MQ=255) cACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggg > 1:41695‑M1/1‑60 (MQ=255) cACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGGGCCTGTGGCGCATCCGGCGTGGCggggggg < 2:41695‑M1/67‑8 (MQ=255) gcgcTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcagggggttgccg > 1:862871‑M1/1‑56 (MQ=255) tgctgTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact > 1:213243‑M1/1‑52 (MQ=255) tgctgTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccact < 2:213243‑M1/82‑31 (MQ=255) tggCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcg < 2:406232‑M1/139‑103 (MQ=255) tggCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCgggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcg > 1:406232‑M1/1‑37 (MQ=255) gtgtgCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctga < 2:13933‑M1/50‑24 (MQ=255) gtgtgCCTGTGGCGCATCCGGCGTGGCggggggggggtctctgctgctga > 1:13933‑M1/1‑27 (MQ=255) gtgCCTGTGGCGCATCCGGCGTGGCggggggggggt < 2:272401‑M1/36‑12 (MQ=255) gtgCCTGTGGCGCATCCGGCGTGGCggggggggggt > 1:272401‑M1/1‑25 (MQ=255) cTGTGGTGCATCCGGCGTGGCgggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcgtattgcaggactcttgcg < 1:200413‑M1/139‑119 (MQ=255) tgtgGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaa < 2:684344‑M1/77‑58 (MQ=255) tgtgGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaa > 1:684344‑M1/1‑20 (MQ=255) tgGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcgtattgcaggactcttgcgaa > 2:750274‑M1/1‑18 (MQ=255) tgGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggc < 2:495611‑M1/51‑34 (MQ=255) tgGCGCATCCGGCGTGGCggggggggggtctctgctgctgatcccactggc > 1:495611‑M1/1‑18 (MQ=255) gcgcATCCGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcgtattgcaggactcttgcgaaac > 2:244289‑M1/1‑16 (MQ=255) cGGCGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcgtattgcaggactcttgcgaaaccgcgctg < 1:785186‑M1/139‑131 (MQ=255) cGTGGCggggggggggtctctgctgctgatcccactggcctgtaatatgttcggtatttcgaacgatatcgccatgcaggtggttgccgtcggctttatcatcggcgtattgcaggactcttgcgaaaccgcgctgaac > 1:180415‑M1/1‑6 (MQ=255) | GGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCT > NC_000913/3240847‑3241110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |