| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,205,731 | G→A | *61* (TAG→TAA) pseudogene (1/412 nt) |
ymfR → beeE → |
e14 prophage, uncharacterized protein pseudogene, portal protein family, e14 prophage,Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,205,731 | 0 | G | A | 100.0% | 83.0 / NA | 28 | *61* (TAG→TAA) pseudogene (1/412 nt) | ymfR beeE | e14 prophage, uncharacterized protein pseudogene, portal protein family, e14 prophage,Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (16/12); total (16/12) | |||||||||||
GCTGGCGTATGGTGCCTGGCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAGTGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGATCAGCAG > NC_000913/1205599‑1205846 | gCTGGCGTATGGTGCCTGGCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCt < 2:499040/139‑1 (MQ=255) gCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAAc > 2:717100/1‑139 (MQ=255) aTTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTGAATAATGTTCTTTTCGGGATTATTTCAACGaaa < 1:873960/139‑1 (MQ=255) gcggGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCAcc > 1:721157/1‑139 (MQ=255) tgCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGAc > 2:358599/1‑131 (MQ=255) tgCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGAc < 1:358599/131‑1 (MQ=255) ccGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCcagc > 1:597021/1‑138 (MQ=255) ccGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGACTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCcagc < 2:597021/138‑1 (MQ=255) gCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGAt > 1:664610/1‑139 (MQ=255) ggTCGTGGCTGGTGGCGCGAGATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGAGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCggg < 1:822359/139‑1 (MQ=255) tggCGCGATATCTCGACCGTACACGGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGaaa > 1:136905/1‑78 (MQ=255) tggCGCGATATCTCGACCGTACACGGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGaaa < 2:136905/78‑1 (MQ=255) tACACAGTCGTCTGTCGGCGGAGGTAAATAATGtt > 2:815772/1‑35 (MQ=255) tACACAGTCGTCTGTCGGCGGAGGTAAATAATGtt < 1:815772/35‑1 (MQ=255) acacAGTCGTCTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGAt > 2:6565/1‑139 (MQ=255) acaGTCGTCTGTCGGCGGAGGTAAATAATGTTCttt > 1:696675/1‑36 (MQ=255) acaGTCGTCTGTCGGCGGAGGTAAATAATGTTCttt < 2:696675/36‑1 (MQ=255) tcgtcTGTCGGCGGAGGTACACAACGTTCTTTTCGGGATGATTTGAACGAAAAAGTGACGCACGGGTGACTACGCCAGCAGAGCTGGCGGATCTCATCGCGCTGTCGTATGACACCTATACCGGAAAGCAGATcagcag > 1:13728/1‑139 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGaaa > 1:269014/1‑52 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGaaa < 2:269014/52‑1 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACg < 1:672968/60‑1 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACg > 2:672968/1‑60 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGATcagcag > 1:202989/1‑139 (MQ=255) tcgtcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCATATGACACCTATACCGGAAAGCAGATcagcag > 2:847712/1‑139 (MQ=255) tcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCcagca < 2:108176/77‑1 (MQ=255) tcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCcagca > 1:108176/1‑77 (MQ=255) tcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTAt > 2:104003/1‑107 (MQ=255) tcTGTCGGCGGAGGTAAATAATGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTAt < 1:104003/107‑1 (MQ=255) | GCTGGCGTATGGTGCCTGGCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAGTGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGATCAGCAG > NC_000913/1205599‑1205846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |