| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,606,561 | A→G | K154K (AAA→AAG) | lsrF → | putative autoinducer‑2 (AI‑2) aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,606,561 | 0 | A | G | 100.0% | 96.2 / NA | 27 | K154K (AAA→AAG) | lsrF | putative autoinducer‑2 (AI‑2) aldolase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (13/14); total (13/14) | |||||||||||
CGAACTCTATTCTGGCGGAATTAAGTAATGAAGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAAAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATCG > NC_000913/1606431‑1606679 | cGAACTCTATTCTGGCGGAATTAAGTAATGAAGCCGTGGCGTTGTCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAAtattat > 1:648173/1‑139 (MQ=255) cGGAATTAAGTAATGAAGACGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGTGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGc < 1:626559/139‑1 (MQ=255) ttAAGTAATGAAGCCGTGGCGTTGTCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGaa < 2:648173/139‑1 (MQ=255) gTAATGAAGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGaa < 2:497491/139‑1 (MQ=255) aaGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAAtatta > 1:204555/1‑108 (MQ=255) aaGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAAtatta < 2:204555/108‑1 (MQ=255) aaGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGc > 2:551979/1‑124 (MQ=255) aaGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGc < 1:551979/124‑1 (MQ=255) gTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGAcc < 1:229926/139‑1 (MQ=255) cgcCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCa > 1:57708/1‑139 (MQ=255) gcgcGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCg < 1:769198/120‑1 (MQ=255) gcgcGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCg > 2:769198/1‑120 (MQ=255) cgcgGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTgcgc < 2:90720/139‑1 (MQ=255) gCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGAc > 2:288634/1‑139 (MQ=255) gCAGCGAATATGAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGAc > 2:293818/1‑139 (MQ=255) gAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGat > 1:628038/1‑93 (MQ=255) gAACATCAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGat < 2:628038/93‑1 (MQ=255) cAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGt < 2:933096/47‑1 (MQ=255) cAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGt > 1:933096/1‑47 (MQ=255) cAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATc > 2:595783/1‑100 (MQ=255) cAGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATc < 1:595783/100‑1 (MQ=255) aGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTggg > 2:357294/1‑79 (MQ=255) aGTCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTggg < 1:357294/79‑1 (MQ=255) tCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCg < 2:659/73‑1 (MQ=255) tCGATCAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCg > 1:659/1‑73 (MQ=255) cAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATcg < 2:393642/122‑1 (MQ=255) cAAGAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATcg > 1:393642/1‑122 (MQ=255) | CGAACTCTATTCTGGCGGAATTAAGTAATGAAGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAAAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATCG > NC_000913/1606431‑1606679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |