| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,881,431 | C→T | P297P (CCG→CCA) | dnaN ← | DNA polymerase III, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,881,431 | 0 | C | T | 100.0% | 72.8 / NA | 24 | P297P (CCG→CCA) | dnaN | DNA polymerase III, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/12); total (12/12) | |||||||||||
TTCAGCGCGTTCAGAACATCCAGCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCCGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCCGCGCGAGCAAACGCCTGCTTGAGCAGATCGCAGCCA > NC_000913/3881327‑3881548 | ttCAGCGCGTTCAGAACATCCAGCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGc < 1:912660/139‑1 (MQ=255) cgTTCAGAACATCCAGCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATa < 1:187575/139‑1 (MQ=255) tCAGAACATCCAGCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAg > 1:786456/1‑139 (MQ=255) gCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCt < 1:212307/118‑1 (MQ=255) gCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCt > 2:212307/1‑118 (MQ=255) tAACTGACGTTGAAGCCGATTTCCATCGCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAtt < 1:782394/139‑1 (MQ=255) aaCTGACGTTGAAGCAGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAttt > 2:226009/1‑139 (MQ=255) gAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTagag > 2:924420/1‑139 (MQ=255) aaGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTagaga < 2:412556/139‑1 (MQ=255) aGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTagagag > 1:117472/1‑139 (MQ=255) aTCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCcgcgc < 1:226009/139‑1 (MQ=255) aaCGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAATGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCCGCGCGAGCAAACGCCTGCTTGAGc > 2:667428/1‑139 (MQ=255) cGTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAtt > 2:493821/1‑93 (MQ=255) cGTCGAGGAACTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAtt < 1:493821/93‑1 (MQ=255) gTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCg < 1:495507/64‑1 (MQ=255) gTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCg > 2:495507/1‑64 (MQ=255) gTCGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCCGCGCGAGCAAACGCCTGCTTGAGCAGa > 2:362535/1‑139 (MQ=255) cGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGGTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAtt > 1:627956/1‑90 (MQ=255) cGAGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAAtt < 2:627956/90‑1 (MQ=255) aGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGc < 1:145923/61‑1 (MQ=255) aGGATCTCTTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGc > 2:145923/1‑61 (MQ=255) ctctTCCGCTTCTTCCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCCGCGCGAGCAAACGCCTGCTTGAGCAGATCGcagcca < 2:117472/139‑1 (MQ=255) tcCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCg > 2:821054/1‑75 (MQ=255) tcCTGTTCTGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCg < 1:821054/75‑1 (MQ=255) | TTCAGCGCGTTCAGAACATCCAGCACATAACTGACGTTGAAGCCGATTTCCATCTCCGCACCGCTATAGGTAACGTCGAGGATCTCTTCCGCTTCTTCCTGTTCCGGGTTGTTGGCGGTGATTTTCAGCTGGTTTTCGCTGACATAAAGACGTACGCCGCGGAATTTCTCGTTAGAGAGAATCGCCGCGCGAGCAAACGCCTGCTTGAGCAGATCGCAGCCA > NC_000913/3881327‑3881548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |