| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,553,337 | C→T | P146L (CCG→CTG) | uxuB → | D‑mannonate oxidoreductase, NAD‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,553,337 | 0 | C | T | 100.0% | 87.4 / NA | 29 | P146L (CCG→CTG) | uxuB | D‑mannonate oxidoreductase, NAD‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/17); total (12/17) | |||||||||||
ATCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTGCGTGAAAA > NC_000913/4553205‑4553472 | aTCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGAt < 1:857527/139‑1 (MQ=255) gAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAATGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGc < 1:323401/139‑1 (MQ=255) aTTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTg > 2:236339/1‑139 (MQ=255) ttCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTgc > 1:427100/1‑139 (MQ=255) cgcgATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCa > 2:9787/1‑111 (MQ=255) cgcgATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCa < 1:9787/111‑1 (MQ=255) gcgcGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCGCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGa < 2:360223/139‑1 (MQ=255) cgcgTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGAt < 2:427100/139‑1 (MQ=255) attgtctctctcTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGa < 1:649688/133‑1 (MQ=255) aCGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGa < 1:628027/103‑1 (MQ=255) aCGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGa > 2:628027/1‑103 (MQ=255) aCGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTg < 1:811037/139‑1 (MQ=255) cTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGt < 1:57683/78‑1 (MQ=255) cTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGt > 2:57683/1‑78 (MQ=255) cTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGtt < 2:319934/139‑1 (MQ=255) gCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGt > 2:661050/1‑81 (MQ=255) gCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGt < 1:661050/81‑1 (MQ=255) gCAAGCGGTCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGa > 2:778815/1‑139 (MQ=255) cGGTCAACTGGATCTCAATAACCTGCTGATCAAGc > 2:50514/1‑35 (MQ=255) cGGTCAACTGGATCTCAATAACCTGCTGATCAAGc < 1:50514/35‑1 (MQ=255) tCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGc < 1:778815/139‑1 (MQ=255) tCAACTGGATCTCAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGc > 2:7439/1‑139 (MQ=255) ctcAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCg > 2:423422/1‑48 (MQ=255) ctcAATAACCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCg < 1:423422/48‑1 (MQ=255) tAACCTGCTGATCAAGCACGATCTGGAAAACCCGa < 2:608990/35‑1 (MQ=255) tAACCTGCTGATCAAGCACGATCTGGAAAACCCGa > 1:608990/1‑35 (MQ=255) aCCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCg > 2:199172/1‑71 (MQ=255) aCCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCg < 1:199172/71‑1 (MQ=255) aCCTGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTGCGTGaaaa < 2:567253/139‑1 (MQ=255) | ATCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTGCGTGAAAA > NC_000913/4553205‑4553472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |