| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 82 [0] | [0] 80 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 80 (1.190) | 51/204 | 0.1 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
TTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCG > NC_000913/4489996‑4490242 | ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa > 1:929449‑M1/1‑120 (MQ=255) cATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg < 1:474599‑M1/139‑25 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttg > 1:815606‑M1/1‑112 (MQ=255) cAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtga > 2:1499219‑M1/1‑106 (MQ=255) cAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtga > 2:955521‑M1/1‑106 (MQ=255) gTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgata < 2:815606‑M1/139‑36 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa < 1:716912‑M1/102‑10 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa > 2:716912‑M1/1‑93 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag < 1:419206‑M1/139‑51 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 2:1576670‑M1/139‑56 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:1499219‑M1/139‑56 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 1:1576670‑M1/1‑84 (MQ=255) ggCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaacctgatacccgaggtcaa < 1:955521‑M1/139‑56 (MQ=255) tGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc > 2:1642428‑M1/1‑80 (MQ=255) tGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc < 1:1642428‑M1/127‑48 (MQ=255) gCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtg < 2:929449‑M1/139‑61 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa > 1:1651601‑M1/1‑76 (MQ=255) ggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa < 2:1651601‑M1/85‑10 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCTAAGAGAgaagagaaaataacttaaagcgtgttgc > 1:129578‑M1/1‑65 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCTAAGAGAgaagagaaaataacttaaagcgtgttgc < 2:129578‑M1/93‑29 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatc > 2:997735‑M1/1‑65 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 2:1435133‑M1/118‑56 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 1:1435133‑M1/1‑63 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa > 2:1048811‑M1/1‑63 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaa < 1:1048811‑M1/82‑20 (MQ=255) gTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtt < 1:997735‑M1/139‑78 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtta > 2:615140‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatac < 1:526514‑M1/106‑46 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatac > 2:526514‑M1/1‑61 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGTAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatt > 2:895060‑M1/1‑59 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 2:1149572‑M1/1‑59 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:1149572‑M1/114‑56 (MQ=255) aCTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaa > 2:332616‑M1/1‑58 (MQ=255) aCTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaa < 1:332616‑M1/76‑19 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAgaga < 1:720688/49‑1 (MQ=255) atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAgaga > 2:720688/1‑49 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgct < 2:64369‑M1/139‑93 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat < 2:501543‑M1/81‑35 (MQ=255) atCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat > 1:501543‑M1/1‑47 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaagtaacttaaagcgtg < 2:1015224‑M1/70‑25 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctc > 1:694826‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 2:419990‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:419990‑M1/101‑56 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggt < 2:97533‑M1/98‑53 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggt > 1:97533‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc < 2:1058214‑M1/93‑48 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgataccc > 1:1058214‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg > 1:1015224‑M1/1‑46 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGTAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcag < 1:895060‑M1/139‑96 (MQ=255) cAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaatttggctcagcaa > 1:1147145‑M1/1‑41 (MQ=255) ctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg > 1:1568526‑M1/1‑34 (MQ=255) ctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttg < 2:1568526‑M1/97‑64 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccg < 2:368820‑M1/63‑31 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccg > 1:368820‑M1/1‑33 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg < 1:1412071‑M1/57‑25 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg > 2:1412071‑M1/1‑33 (MQ=255) cctgGAGTATAGGCAACGTCCGGTAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg < 1:800241‑M1/139‑109 (MQ=255) ctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcgg < 1:615140‑M1/139‑110 (MQ=255) tgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggc > 1:795685‑M1/1‑29 (MQ=255) aGTATAGGCAACGTCCGGCAAAGAGAgaagagaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt > 1:331721‑M1/1‑26 (MQ=255) aGTATAGGCAACGTCCGGCAAAGAGAgaagagaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt < 2:331721‑M1/87‑62 (MQ=255) aGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtg > 2:1327572‑M1/1‑26 (MQ=255) aGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtg < 1:1327572‑M1/86‑61 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagc < 2:1645364‑M1/118‑97 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagc > 1:1645364‑M1/1‑22 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac < 2:795685‑M1/139‑119 (MQ=255) aaCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac < 2:1502428‑M1/135‑119 (MQ=255) aaCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac > 1:1502428‑M1/1‑17 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat > 2:1448298‑M1/1‑16 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat < 1:1448298‑M1/129‑114 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgcc < 1:687884‑M1/45‑30 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgcc > 2:687884‑M1/1‑16 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgata > 1:1550207‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgata < 2:1550207‑M1/50‑36 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat > 2:269490‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat < 1:269490‑M1/49‑35 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatc > 2:3265‑M1/1‑14 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtca > 1:260485‑M1/1‑14 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtca < 2:260485‑M1/68‑55 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 2:1024880‑M1/42‑29 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc > 1:1024880‑M1/1‑14 (MQ=255) ccGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtcgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaa > 1:1113670‑M1/1‑12 (MQ=255) | TTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCG > NC_000913/4489996‑4490242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |