Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3413552	3413620	69	22 [16]	[18] 20	acrS/acrE	acrAB operon transcriptional repressor/cytoplasmic membrane lipoprotein

ACCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCATAACTATTCCTTACATC  >  NC_000913/3413604‑3413758                  |                                                                                                                                          aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTa                                                                    <  1:428220/89‑1 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTa                                                                    >  2:428220/1‑89 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            <  1:1205173/97‑1 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            <  1:426766/97‑1 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            >  2:1205173/1‑97 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            >  2:426766/1‑97 (MQ=255) aCCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCAt                  >  2:738368/1‑139 (MQ=255)   cTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTgaga                               <  2:779926/124‑1 (MQ=255)   cTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTgaga                               >  1:779926/1‑124 (MQ=255)      aGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCATAACTa             >  1:1605737/1‑139 (MQ=255)             ttCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGt                                                                                   >  1:1571923/1‑62 (MQ=255)             ttCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGt                                                                                   <  2:1571923/62‑1 (MQ=255)             ttCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            <  1:1438365/85‑1 (MQ=255)             ttCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTa                                                            >  2:1438365/1‑85 (MQ=255)             ttCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCATAACTATTCCTTa      >  2:1230526/1‑139 (MQ=255)                aCTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGc                            >  2:1571697/1‑114 (MQ=255)                aCTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGc                            <  1:1571697/114‑1 (MQ=255)                 cTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCATAACTATTCCTTACATc  >  2:1223678/1‑139 (MQ=255)                  tACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATaaaa                                                                         >  2:1504665/1‑67 (MQ=255)                  tACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATaaaa                                                                         <  1:1504665/67‑1 (MQ=255)                  |                                                                                                                                          ACCTAAGATACATTCACTACATCAATATATATTTCAATTTACGAGGTTTTAATTCTGCCTCTTTCAACCCGCGTCAAAATAAAACAGTAGAATATTAATCTTTTTTTGTGTTTATGTGCCTTGAGATGCCTGTATTCATAACTATTCCTTACATC  >  NC_000913/3413604‑3413758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑