Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 649,372 | A→G | F67S (TTC→TCC) | citF ← | citrate lyase, citrate‑ACP transferase (alpha) subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 649,372 | 0 | A | G | 100.0% | 273.8 / NA | 76 | F67S (TTC→TCC) | citF | citrate lyase, citrate‑ACP transferase (alpha) subunit |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (37/39); total (37/39) |
TGTGTTCTACCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGAAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGCGAGTTCTGGAAAGCGGCAAGA > NC_000913/649241‑649500 | tgtgTTCTACCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAAc > 2:1112546/1‑139 (MQ=255) tCTACCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCa > 2:740452/1‑139 (MQ=255) tCTACCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCa > 1:447266/1‑139 (MQ=255) aCCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGc > 2:342994/1‑139 (MQ=255) cAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg < 1:740452/139‑1 (MQ=255) cAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg < 1:651812/139‑1 (MQ=255) cAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg < 2:198496/139‑1 (MQ=255) gcgcATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTg > 2:472342/1‑139 (MQ=255) cATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTaa > 1:799028/1‑139 (MQ=255) gggAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAAc > 2:14836/1‑126 (MQ=255) gggAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAAc < 1:14836/126‑1 (MQ=255) aGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCACCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg < 2:382649/113‑1 (MQ=255) aGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCACCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg > 1:382649/1‑113 (MQ=255) cTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGctt > 1:1624579/1‑139 (MQ=255) ggACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACGGCCAC‑GGAAAGCGTGATgggagga > 1:959067/1‑96 (MQ=255) ggACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATgggagga < 2:959067/96‑1 (MQ=255) cAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGgcg < 2:447266/139‑1 (MQ=255) ggTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:884526/139‑1 (MQ=255) ggTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 2:799028/139‑1 (MQ=255) ggTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:342994/139‑1 (MQ=255) ggTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:345479/139‑1 (MQ=255) cccATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCg > 1:105030/1‑109 (MQ=255) cccATCTTCGCGATGACGTCCATCACCATAATGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCg < 2:105030/109‑1 (MQ=255) atggacgtCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGAt > 1:1651505/8‑139 (MQ=255) ttCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATcgcgcg < 1:587168/139‑1 (MQ=255) cgcgATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATgggagga > 1:948214/1‑63 (MQ=255) cgcgATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATgggagga < 2:948214/63‑1 (MQ=255) gcgATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:261642/119‑1 (MQ=255) gcgATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 2:261642/1‑119 (MQ=255) tGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc > 2:794476/1‑97 (MQ=255) tGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc < 1:794476/97‑1 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg > 1:284768/1‑69 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCg < 2:284768/69‑1 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTa < 1:414286/76‑1 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTa > 2:414286/1‑76 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTa < 1:262722/76‑1 (MQ=255) aCGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTa > 2:262722/1‑76 (MQ=255) tCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATgggagga < 2:68690/53‑1 (MQ=255) tCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATgggagga > 1:68690/1‑53 (MQ=255) ccATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGcc < 1:616106/137‑1 (MQ=255) ccATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGcc > 2:616106/1‑137 (MQ=255) tatTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCttcttc > 1:569489/1‑88 (MQ=255) tatTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCttcttc < 2:569489/88‑1 (MQ=255) tatTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTg > 1:642627/1‑139 (MQ=255) ttGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCt < 2:1651505/139‑1 (MQ=255) aCGGTCAGGTCACCGCCACGGGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:1546870/96‑1 (MQ=255) aCGGTCAGGTCACCGCCACGGGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 2:1546870/1‑96 (MQ=255) aCGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:1224704/95‑1 (MQ=255) aCGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 2:1224704/1‑95 (MQ=255) ggtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 2:240634/1‑93 (MQ=255) ggtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:240634/93‑1 (MQ=255) ggtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc < 1:472342/139‑1 (MQ=255) ggtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc < 2:1624579/139‑1 (MQ=255) gtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc < 1:1107765/74‑1 (MQ=255) gtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc > 2:1107765/1‑74 (MQ=255) gtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGgcg > 1:204739/1‑90 (MQ=255) gtcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGgcg < 2:204739/90‑1 (MQ=255) tcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 2:1135431/1‑91 (MQ=255) tcaggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 1:1135431/91‑1 (MQ=255) caggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct > 2:1208912/1‑73 (MQ=255) caggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct < 1:1208912/73‑1 (MQ=255) ggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGcc > 2:232509/1‑43 (MQ=255) ggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGcc < 1:232509/43‑1 (MQ=255) ggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc > 1:578531/1‑134 (MQ=255) ggtcaCCGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc < 2:578531/134‑1 (MQ=255) cGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct < 1:531087/65‑1 (MQ=255) cGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct > 2:531087/1‑65 (MQ=255) cGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAgg > 2:180386/1‑74 (MQ=255) cGCCAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAgg < 1:180386/74‑1 (MQ=255) cAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAgg > 1:1551762/1‑71 (MQ=255) cAC‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAgg < 2:1551762/71‑1 (MQ=255) c‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct < 1:1352308/60‑1 (MQ=255) c‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGct > 2:1352308/1‑60 (MQ=255) c‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTCCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc < 2:991623/123‑1 (MQ=255) c‑GGAAAGCGTGATGGGAGGAAACCGTCATGCCATCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGc > 1:991623/1‑123 (MQ=255) aGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc < 2:73454/54‑1 (MQ=255) aGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGc > 1:73454/1‑54 (MQ=255) aGCGTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGCGAGTTCTGGAAAGCGGCAAGa > 2:599335/1‑139 (MQ=255) gTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca < 2:457485/69‑1 (MQ=255) gTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGca > 1:457485/1‑69 (MQ=255) gTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGCGAGTTCTGGAAAGCGGCa < 2:774231/133‑1 (MQ=255) gTGATGGGAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGCGAGTTCTGGAAAGCGGCa > 1:774231/1‑133 (MQ=255) | TGTGTTCTACCAGCGGCGCATGGCAATCACTCAGGGAGCTGGACGCCAGGGTCAGGTTTTTAAAGCCCATCTTCGCGATGACGTCCATCACCATATTGACGGTCAGGTCACCGCCAC‑GGAAAGCGTGATGGAAGGAAACCGTCATGCCGTCCTGTAAACCAGAGCGACGAATCGCTTCTTCCAGGTTGGCGCACAGTTTGCGATCGCGCGCTTTTTCAGCCTGGTAGGTTTGCTTTGGCGAGTTCTGGAAAGCGGCAAGA > NC_000913/649241‑649500 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |