| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,208,517 | C→T | P129L (CCT→CTT) *201* (TAG→TAA) |
tfaP → tfaE ← |
e14 prophage, uncharacterized protein e14 prophage, putative tail fiber assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,208,517 | 0 | C | T | 100.0% | 228.5 / NA | 76 | P129L (CCT→CTT) *201* (TAG→TAA) | tfaP tfaE | e14 prophage, uncharacterized protein e14 prophage, putative tail fiber assembly protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (39/37); total (39/37) | |||||||||||
TGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTT > NC_000913/1208393‑1208636 | tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAg > 2:46750/1‑139 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTcc > 2:1572179/1‑128 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTcc < 1:1572179/128‑1 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttaggc < 2:1397859/139‑5 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtt > 1:1250542/1‑135 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtt < 2:1250542/135‑1 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt < 2:1114337/134‑1 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAATGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt > 1:1114337/1‑134 (MQ=255) ggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACCGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgc > 2:721462/1‑139 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 2:804343/139‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 1:46750/139‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 1:1273779/139‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 1:196658/139‑1 (MQ=255) cTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACCGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTg < 1:721462/139‑1 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 1:866579/1‑139 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg > 1:760363/1‑124 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 2:760363/124‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACCGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTg < 1:1115474/139‑1 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 1:1429397/1‑139 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt > 2:1368715/1‑139 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg > 2:617338/1‑76 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg < 2:628281/76‑1 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg > 1:628281/1‑76 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg < 1:617338/76‑1 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg > 1:981671/1‑100 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGgcg < 2:981671/100‑1 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt > 1:49443/1‑130 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 2:49443/130‑1 (MQ=255) tGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCa > 1:1370372/1‑139 (MQ=255) tCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGc > 1:1606005/1‑139 (MQ=255) aGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCgg > 1:559517/1‑82 (MQ=17) aGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCgg < 2:559517/82‑1 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:887039/115‑1 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg > 1:887039/1‑115 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc > 1:676700/1‑124 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc < 2:676700/124‑1 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 2:1559950/1‑139 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 1:1022705/1‑139 (MQ=255) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTg > 2:1069637/1‑84 (MQ=17) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTg < 1:1069637/84‑1 (MQ=17) gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGcc < 1:401541/41‑1 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGcc > 2:401541/1‑41 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct > 2:676080/1‑139 (MQ=255) gATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc < 1:676080/139‑1 (MQ=255) aTACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt > 2:1235434/1‑119 (MQ=255) aTACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt < 1:1235434/119‑1 (MQ=255) tACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcctg > 1:355517/1‑139 (MQ=255) tACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcctg > 1:743151/1‑139 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcctgctt < 2:1606005/139‑3 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 2:1370372/139‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 2:355517/139‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 2:866579/139‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 1:1368715/139‑1 (MQ=255) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt > 2:1294030/1‑50 (MQ=14) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt < 1:1294030/50‑1 (MQ=14) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTAt > 2:862453/1‑73 (MQ=11) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTAt < 1:862453/73‑1 (MQ=11) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 1:946695/91‑1 (MQ=255) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt > 2:946695/1‑91 (MQ=255) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt > 2:1059620/1‑113 (MQ=255) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt < 1:1059620/113‑1 (MQ=255) ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCa > 2:427483/1‑139 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCTTCACCGCGTCAATg < 2:1014855/92‑1 (MQ=11) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg > 1:1014855/1‑92 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca > 1:1352164/1‑102 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 2:1352164/102‑1 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc < 1:1541026/127‑1 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc > 2:1541026/1‑127 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 2:54594/1‑139 (MQ=255) tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 2:1393993/1‑139 (MQ=255) gcgcCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt > 1:1584499/1‑45 (MQ=14) gcgcCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGAt < 2:1584499/45‑1 (MQ=14) gcgcCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGt > 1:1394340/1‑60 (MQ=11) gcgcCAGATATTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGt < 2:1394340/60‑1 (MQ=11) atatTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 2:539019/74‑1 (MQ=11) atatTGAATGGCTTACGCCTCCGGCAGTT‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc > 1:539019/1‑74 (MQ=11) | TGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTT > NC_000913/1208393‑1208636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |