| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,006,526 | A→G | D124G (GAC→GGC) | amyA → | cytoplasmic alpha‑amylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,006,526 | 0 | A | G | 97.9% | 335.3 / ‑3.1 | 97 | D124G (GAC→GGC) | amyA | cytoplasmic alpha‑amylase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (47/48); total (48/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.82e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
ACAACTGCTGGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAACC > NC_000913/2006398‑2006660 | acaACTGCTGGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCaa > 1:185187/1‑139 (MQ=255) ctgctgGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTg < 2:1289592/139‑1 (MQ=255) ctgctgGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTg > 2:724867/1‑139 (MQ=255) ctgGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACg > 2:157394/1‑139 (MQ=255) tgGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACga < 1:157394/139‑1 (MQ=255) tgGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACga < 1:1461440/139‑1 (MQ=255) ggCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaa > 1:902568/1‑139 (MQ=255) cgccATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaagaa > 2:710998/1‑139 (MQ=255) ttGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCAt < 1:331449/139‑1 (MQ=255) tGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCa < 2:1482550/129‑1 (MQ=255) tGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCa > 1:1482550/1‑129 (MQ=255) gAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGaa > 2:1164165/1‑139 (MQ=255) gAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGaa > 2:1657745/1‑139 (MQ=255) aaaCGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag < 2:925267/121‑1 (MQ=255) aaaCGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag > 1:925267/1‑121 (MQ=255) aaaCGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTg < 2:1233393/130‑1 (MQ=255) aaaCGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTg > 1:1233393/1‑130 (MQ=255) aaTGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGa < 1:334349/139‑1 (MQ=255) aCATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGAcgcg > 2:1528589/1‑139 (MQ=255) ttGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTa < 2:842944/139‑1 (MQ=255) tGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTac > 1:776100/1‑139 (MQ=255) cGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTacac > 1:839294/1‑139 (MQ=255) cGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTacac > 2:1446838/1‑139 (MQ=255) ttGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCAtt < 2:562154/105‑1 (MQ=255) ttGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCAtt > 1:562154/1‑105 (MQ=255) tGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgc < 2:776100/139‑1 (MQ=255) gATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgccc < 1:710998/139‑1 (MQ=255) tgtgGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGa > 2:358477/1‑87 (MQ=255) tgtgGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGa < 1:358477/87‑1 (MQ=255) tgGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTa > 1:1533557/1‑75 (MQ=255) tgGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTa < 2:1533557/75‑1 (MQ=255) ggTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGcc < 1:1164165/139‑1 (MQ=255) tAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag < 1:829692/87‑1 (MQ=255) tAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag > 2:829692/1‑87 (MQ=255) tCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgc < 2:281233/127‑1 (MQ=255) tCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgc > 1:281233/1‑127 (MQ=255) tCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCa > 2:516996/1‑139 (MQ=255) aaCCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGAc > 2:141918/1‑78 (MQ=255) aaCCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGAc < 1:141918/78‑1 (MQ=255) aaCCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGtgtg > 2:1583053/1‑97 (MQ=255) aaCCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGtgtg < 1:1583053/97‑1 (MQ=255) ccACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGc > 2:1611193/1‑129 (MQ=255) ccACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGc < 1:1611193/129‑1 (MQ=255) ccACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATAc > 1:223161/1‑139 (MQ=255) cacaAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgc > 1:876155/1‑122 (MQ=255) cacaAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCcccgc < 2:876155/122‑1 (MQ=255) cacaAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACt < 1:1657745/139‑1 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACg > 1:1396144/1‑64 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACg < 2:1396144/64‑1 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGt > 1:522391/1‑106 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGt < 2:522391/106‑1 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCg < 2:185187/139‑1 (MQ=255) caAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCg > 1:1029972/1‑139 (MQ=255) aaaTGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCa < 2:902568/139‑1 (MQ=255) ggCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTaca > 1:1022724/1‑103 (MQ=255) ggCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTaca < 2:1022724/103‑1 (MQ=255) gcgcGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACt < 1:1486224/129‑1 (MQ=255) cgcgGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTaca < 2:121839/101‑1 (MQ=255) cgcgGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTaca > 1:121839/1‑101 (MQ=255) cgGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAAt > 2:1113357/1‑123 (MQ=255) cgGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAAt < 1:1113357/123‑1 (MQ=255) gATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTggg > 1:600298/1‑139 (MQ=255) agaagCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaaa < 2:1107377/139‑1 (MQ=255) agaagCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaaa < 1:516996/139‑1 (MQ=255) agaagCTATTCGCGGGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaaa < 2:1029972/139‑1 (MQ=255) agCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATCCTCGCa > 2:1000314/1‑117 (MQ=255) agCTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCa < 1:1000314/117‑1 (MQ=255) cTATTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGttt < 2:600298/139‑1 (MQ=255) aTTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaa < 1:894512/131‑1 (MQ=255) aTTCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaa > 2:894512/1‑131 (MQ=255) ttCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGc < 1:1503940/102‑1 (MQ=255) ttCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGc > 2:1503940/1‑102 (MQ=255) ttCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAg < 1:1528589/139‑1 (MQ=255) ttCGCGTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAg < 2:863367/139‑1 (MQ=255) cgcgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag > 1:207995/1‑46 (MQ=255) cgcgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACgaag < 2:207995/46‑1 (MQ=255) cgcgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaaa > 1:237587/1‑129 (MQ=255) cgcgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCaaa < 2:237587/129‑1 (MQ=255) cgcgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTAAACCTTCCCAGCACGTGCCGGGCAATACTCGCAGTTTATATGGGAATTCAAATGTTTTAGCg > 1:1107377/1‑139 (MQ=255) cgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTg < 1:129487/53‑1 (MQ=255) cgTGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTg > 2:129487/1‑53 (MQ=255) tGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGAc < 2:1552500/38‑1 (MQ=255) tGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGAc > 1:1552500/1‑38 (MQ=255) tGCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTAt < 2:223161/139‑1 (MQ=255) gCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGAcg < 1:563393/67‑1 (MQ=255) gCAGCGTGTAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGAcg > 2:563393/1‑67 (MQ=255) gCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGt > 1:1178858/1‑107 (MQ=255) gCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGt < 2:1178858/107‑1 (MQ=255) tgtAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCat > 1:874060/1‑139 (MQ=255) gtAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCata < 2:839294/139‑1 (MQ=255) tAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGa > 1:181371/1‑57 (MQ=255) tAAATGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGa < 2:181371/57‑1 (MQ=255) tGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGCAGGCTGGAc < 2:1121177/54‑1 (MQ=39) tGCTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGAc > 1:1121177/1‑54 (MQ=255) cTGATGGCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGaaaa > 1:493735/1‑139 (MQ=255) gatggCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCg > 1:1661160/1‑87 (MQ=255) gatggCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGAcc > 2:411599/1‑127 (MQ=255) gatggCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAAcc > 2:1355813/1‑139 (MQ=255) gatggCCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAAcc > 1:864118/1‑139 (MQ=255) gatggCCGTACGCAAAGTGACGAAGAAATCATTGAGTGGGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCg < 2:1661160/87‑1 (MQ=255) | ACAACTGCTGGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAACC > NC_000913/2006398‑2006660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |