| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,522,650 | G→A | intergenic (‑173/+79) | xapR ← / ← xapB | transcriptional activator of xapAB/xanthosine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,522,650 | 0 | G | A | 100.0% | 246.7 / NA | 77 | intergenic (‑173/+79) | xapR/xapB | transcriptional activator of xapAB/xanthosine transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (37/40); total (37/40) | |||||||||||
TCATGGCATAAAGTATTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCGATGCTTTATCTTTTCAGGGTCATGATTATATTTA > NC_000913/2522518‑2522780 | tCATGGCATAAAGTATTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaa < 1:401334/139‑1 (MQ=255) tttCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCt > 1:2295/1‑139 (MQ=255) caccaGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaa > 2:149528/1‑118 (MQ=255) caccaGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaa < 1:149528/118‑1 (MQ=255) caccaGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACt > 1:982968/1‑139 (MQ=255) caGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAt < 2:1507330/139‑1 (MQ=255) aGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCGCGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAtt < 2:2295/139‑1 (MQ=255) ccGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAt > 2:45873/1‑132 (MQ=255) ccGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAt < 1:45873/132‑1 (MQ=255) cGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaaat > 2:237821/1‑118 (MQ=255) cGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaaat < 1:237821/118‑1 (MQ=255) cGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt < 2:899020/139‑1 (MQ=255) acatacatAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt > 1:1291479/1‑137 (MQ=255) acatacatAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt < 2:1291479/137‑1 (MQ=255) acataAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaagaa < 2:1323738/104‑1 (MQ=255) acataAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaagaa > 1:1323738/1‑104 (MQ=255) aaaCACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAtt > 1:183745/1‑122 (MQ=255) aaaCACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAtt < 2:183745/122‑1 (MQ=255) acacAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCtt < 1:586269/126‑1 (MQ=255) acacAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCtt > 2:586269/1‑126 (MQ=255) tGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc > 1:299269/1‑107 (MQ=255) tGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc < 2:299269/107‑1 (MQ=255) tGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCATTAAt < 1:971508/113‑1 (MQ=255) tGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAAt > 2:971508/1‑113 (MQ=255) aataTACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAagag > 1:1376360/1‑139 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaata > 1:1514462/1‑84 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaata < 2:1514462/84‑1 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAagcag > 2:660006/1‑122 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAagcag < 1:660006/122‑1 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGcc > 1:387463/1‑139 (MQ=255) aaTACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGaa < 2:982968/139‑1 (MQ=255) aaTACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGaa < 2:387463/139‑1 (MQ=255) tACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt < 1:210972/102‑1 (MQ=255) tACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt > 2:210972/1‑102 (MQ=255) cATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGct < 2:1508769/115‑1 (MQ=255) cATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGct > 1:1508769/1‑115 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCa > 1:710518/1‑82 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCa < 2:710518/82‑1 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTa > 2:1182324/1‑89 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTa < 1:1182324/89‑1 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTaa < 2:1665267/139‑1 (MQ=255) ggTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTaa > 1:1665267/1‑139 (MQ=255) gTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAAt < 2:1376360/139‑1 (MQ=255) gAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGaa > 1:1111951/1‑123 (MQ=255) gAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGaa < 2:1111951/123‑1 (MQ=255) gAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCa > 2:1611844/1‑139 (MQ=255) tAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc > 2:833608/1‑71 (MQ=255) tAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc < 1:833608/71‑1 (MQ=255) aGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaaat > 2:163881/1‑63 (MQ=255) aGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaaat < 1:163881/63‑1 (MQ=255) aaGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaaga < 1:92854/50‑1 (MQ=255) aaGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaaga > 2:92854/1‑50 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaa > 2:244913/1‑55 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGaaaataaa < 1:244913/55‑1 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt > 2:132282/1‑78 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCttt < 1:132282/78‑1 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAag > 2:1162482/1‑88 (MQ=255) gcgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAag < 1:1162482/88‑1 (MQ=255) cgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaa < 1:712677/45‑1 (MQ=255) cgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGgaa > 2:712677/1‑45 (MQ=255) cgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAAt > 1:794628/1‑122 (MQ=255) cgcACGATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAAt < 2:794628/122‑1 (MQ=255) gATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTACTTAACCTTTATCATAAAagcag > 2:992362/1‑85 (MQ=255) gATTGTAAACAAAGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAagcag < 1:992362/85‑1 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc > 2:158506/1‑46 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTc < 1:158506/46‑1 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAagagca < 2:1124849/85‑1 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAagagca > 1:1124849/1‑85 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCg > 1:891404/1‑118 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCg < 2:891404/118‑1 (MQ=255) aGCACCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCGATGCTTTATCTTTTCAGGGTc > 1:1394354/1‑139 (MQ=255) aCCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTc < 2:1443796/114‑1 (MQ=255) aCCAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTc > 1:1443796/1‑114 (MQ=255) cAATACCAAAACCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCGATGCTTTATCTTTTCAGGGTCATGAt < 2:1394354/139‑1 (MQ=255) aaaaCCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCt < 2:577368/104‑1 (MQ=255) aaaaCCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCt > 1:577368/1‑104 (MQ=255) aaaCCAACACCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCGATGCTTTATCTTTTCAGGGTCATGATTATATTTa < 2:1038496/139‑1 (MQ=255) | TCATGGCATAAAGTATTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTAATTAACCTTTATCATAAAAGCAGCTCTGAAGAGCAGAGCCGCGAATCCTTTTAATGAGTCACCGCTCGATGCTTTATCTTTTCAGGGTCATGATTATATTTA > NC_000913/2522518‑2522780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |