Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,769,486	G→A	*274* (TAG→TAA)	yfjQ →	CP4‑57 prophage, uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,769,486	0	G	A	100.0%	264.6 / NA	83	*274* (TAG→TAA)	yfjQ	CP4‑57 prophage, uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (43/40);  total (43/40)

GGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAGACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAA  >  NC_000913/2769354‑2769605                                                                                                                                     |                                                                                                                        gggCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGttt                                                                                                                   >  1:1575498/1‑139 (MQ=255)      gACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAAAGTTTCATGt                                                                                                              >  1:913461/1‑139 (MQ=255)            gTGGGCGTAATGCTAAAGGCGGACGAAGTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  1:961601/139‑1 (MQ=255)            gTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:580454/139‑1 (MQ=255)             tGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACg                                                                                                       <  2:1575498/139‑1 (MQ=255)                   tAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTa                                                                                                 >  2:179723/1‑139 (MQ=255)                       gCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAatat                                                                                             <  1:179723/139‑1 (MQ=255)                          aaaGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCgg                                                                                          >  2:1411428/1‑139 (MQ=255)                                 gACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  2:1468172/1‑118 (MQ=255)                                 gACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:1584274/118‑1 (MQ=255)                                 gACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  1:1468172/118‑1 (MQ=255)                                 gACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:1584274/1‑118 (MQ=255)                                 gACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGAcaccac                                                                                   >  2:756657/1‑139 (MQ=255)                                     aaCTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGt                                                                               <  1:1411428/139‑1 (MQ=255)                                           taagagacaggtgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATAGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCAt                                                                         <  1:1021544/129‑1 (MQ=25)                                                gtgccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACg                                                                                                                      >  2:1357532/1‑89 (MQ=255)                                                gtgccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACg                                                                                                                      <  1:1357532/89‑1 (MQ=255)                                                gtgccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           <  2:1146017/100‑1 (MQ=255)                                                gtgccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           >  1:1146017/1‑100 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGac                                                                                        >  2:368050/1‑117 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGac                                                                                        <  1:368050/117‑1 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCAt                                                                         >  2:285083/1‑132 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCAt                                                                         <  1:285083/132‑1 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTAtg                                                                  >  1:828186/1‑139 (MQ=255)                                                  gccgtgcGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTAtg                                                                  >  2:759226/1‑139 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           >  1:1480138/1‑94 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           >  1:1226462/1‑94 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           <  2:1480138/94‑1 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGc                                                                                                           <  2:1226462/94‑1 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCg                                                                                           >  1:279230/1‑110 (MQ=255)                                                      tgcgtgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCg                                                                                           <  2:279230/110‑1 (MQ=255)                                                          tgGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCgtg                                                          <  1:756657/139‑1 (MQ=255)                                                                tGACGGGCATGTGAAGCTTAACCGCGCGCTGTGGGTGATGGCAGAAACACTACTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATATGCTctgtctctta                                                    >  2:1021544/1‑130 (MQ=21)                                                                       gATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGtt                                                                                                             <  2:117730/75‑1 (MQ=255)                                                                       gATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGtt                                                                                                             >  1:117730/1‑75 (MQ=255)                                                                         tgtgAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:699758/1‑78 (MQ=255)                                                                         tgtgAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:699758/78‑1 (MQ=255)                                                                           tgAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGt                                         <  2:828186/139‑1 (MQ=255)                                                                              aGCTTAAGCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTtat                                      <  2:1553781/139‑1 (MQ=255)                                                                                cTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:1543490/71‑1 (MQ=255)                                                                                cTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:1543490/1‑71 (MQ=255)                                                                                    aCCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACg                                                                                                       >  2:1584813/1‑68 (MQ=255)                                                                                    aCCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACg                                                                                                       <  1:1584813/68‑1 (MQ=255)                                                                                       gTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGc                                                                           <  1:816515/93‑1 (MQ=255)                                                                                       gTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGc                                                                           >  2:816515/1‑93 (MQ=255)                                                                                       gTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTaa                             >  1:1024817/1‑139 (MQ=255)                                                                                        tGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAc                            >  2:752091/1‑139 (MQ=255)                                                                                               tgGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCgtg                                                          >  1:1530881/1‑102 (MQ=255)                                                                                               tgGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCgtg                                                          <  2:1530881/102‑1 (MQ=255)                                                                                                     aTGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAccc                          <  2:322495/128‑1 (MQ=255)                                                                                                     aTGGCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAccc                          >  1:322495/1‑128 (MQ=255)                                                                                                       ggCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGt                      <  1:421026/130‑1 (MQ=255)                                                                                                       ggCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGt                      >  2:421026/1‑130 (MQ=255)                                                                                                       ggCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCt               <  1:446886/137‑1 (MQ=255)                                                                                                       ggCAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCt               >  2:446886/1‑137 (MQ=255)                                                                                                         cAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:627532/1‑46 (MQ=255)                                                                                                         cAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:627532/46‑1 (MQ=255)                                                                                                         cAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTcc                                                                             >  2:159418/1‑73 (MQ=255)                                                                                                         cAGAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTcc                                                                             <  1:159418/73‑1 (MQ=255)                                                                                                           gAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCg                                                                            >  1:608658/1‑72 (MQ=255)                                                                                                           gAAACACTGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCg                                                                            <  2:608658/72‑1 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:1429551/1‑37 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:1429551/37‑1 (MQ=21)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCgtg                                                          <  1:11514/83‑1 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCgtg                                                          >  2:11514/1‑83 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGaa  >  2:1450959/1‑139 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGaa  >  2:463140/1‑139 (MQ=255)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTA‑‑ATCGGACACCACCTGTCCGCa                                                                          >  2:1399326/1‑65 (MQ=18)                                                                                                                  tGCTCACGCAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTA‑‑ATCGGACACCACCTGTCCGCa                                                                          <  1:1399326/65‑1 (MQ=18)                                                                                                                   gCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        <  2:944250/36‑1 (MQ=21)                                                                                                                   gCTCACGCAACTGCAGTAAACGTTTCATGTTGCCAc                                                                                                        >  1:944250/1‑36 (MQ=21)                                                                                                                    cTCACGCAACTGCAGTAAACGTTTCATGTTGCCACg                                                                                                       >  1:760769/1‑36 (MQ=255)                                                                                                                    cTCACGCAACTGCAGTAAACGTTTCATGTTGCCACg                                                                                                       <  2:760769/36‑1 (MQ=255)                                                                                                                          cAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATcc                                               <  2:387495/86‑1 (MQ=255)                                                                                                                          cAACTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATcc                                               >  1:387495/1‑86 (MQ=255)                                                                                                                            aCTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAAt                                                 <  1:162630/82‑1 (MQ=255)                                                                                                                            aCTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAAt                                                 >  2:162630/1‑82 (MQ=255)                                                                                                                            aCTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATccc                                              >  1:1332551/1‑85 (MQ=255)                                                                                                                            aCTGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATccc                                              <  2:1332551/85‑1 (MQ=255)                                                                                                                              tGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTAtg                                                                  <  1:25236/63‑1 (MQ=255)                                                                                                                              tGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTAtg                                                                  >  2:25236/1‑63 (MQ=255)                                                                                                                              tGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAc                            >  1:1479406/1‑101 (MQ=255)                                                                                                                              tGCAGTAAACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAc                            <  2:1479406/101‑1 (MQ=255)                                                                                                                                     |                                                                                                                        GGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAGACGTTTCATGTTGCCACGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAA  >  NC_000913/2769354‑2769605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑