| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,853,155 | G→A | noncoding (103/140 nt) | istR ← | sRNA antisense regulators IstR‑1 and IstR‑2, affectr tisB, Hfq‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,853,155 | 0 | G | A | 98.0% | 323.5 / ‑2.5 | 102 | noncoding (103/140 nt) | istR | sRNA antisense regulators IstR‑1 and IstR‑2, affectr tisB, Hfq‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (51/49); total (52/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
TTTATACAAGCACAGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTGCGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTT > NC_000913/3853021‑3853288 | tttATACAAGCACAGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGc > 2:719536/1‑139 (MQ=255) gCACAGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCg > 1:138753/1‑139 (MQ=255) cacaGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGc > 1:1589392/1‑139 (MQ=255) cacaGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGc > 1:1111649/1‑139 (MQ=255) gCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAg > 2:512984/1‑139 (MQ=255) cTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGc > 1:1499932/1‑139 (MQ=255) tACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 2:470414/139‑1 (MQ=255) tACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:512984/139‑1 (MQ=255) tACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:719536/139‑1 (MQ=255) aCAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGca > 2:91323/1‑136 (MQ=255) aCAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGca < 1:91323/136‑1 (MQ=255) aGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTg > 2:1128770/1‑139 (MQ=255) ggAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGtat < 2:1111649/139‑1 (MQ=255) gagaCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGt > 1:1275023/1‑118 (MQ=255) gagaCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGt < 2:1275023/118‑1 (MQ=255) gagaCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCaaa < 2:437667/127‑1 (MQ=255) gagaCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCaaa > 1:437667/1‑127 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcac > 1:1053997/1‑128 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcac < 2:1053997/128‑1 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCacac < 2:216565/130‑1 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCacac > 1:216565/1‑130 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGtat < 1:981053/135‑1 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGtat > 2:981053/1‑135 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATg > 2:794004/1‑139 (MQ=255) aCAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATg > 1:790462/1‑139 (MQ=255) aaTGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTc < 2:138753/139‑1 (MQ=255) ggAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTGCGGCTGGTAACCGCAAAGcaca > 1:1471845/1‑124 (MQ=255) ggAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTGCGGCTGGTAACCGCAAAGcaca < 2:1471845/124‑1 (MQ=255) aaaaTTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCacac > 1:1550839/1‑123 (MQ=255) aaaaTTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCacac < 2:1550839/123‑1 (MQ=255) cAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 2:566987/110‑1 (MQ=255) cAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 1:566987/1‑110 (MQ=255) aGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCaaa < 1:75069/92‑1 (MQ=255) aGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCaaa > 2:75069/1‑92 (MQ=255) aGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATAc > 2:862735/1‑125 (MQ=255) aGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATAc < 1:862735/125‑1 (MQ=255) aGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGa > 1:161321/1‑139 (MQ=255) gggTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAAc > 2:1458608/1‑139 (MQ=255) ttGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAAcgcg < 2:1499932/139‑1 (MQ=255) gATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:60361/90‑1 (MQ=255) gATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 2:60361/1‑90 (MQ=255) gATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 2:570602/90‑1 (MQ=255) gATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 1:570602/1‑90 (MQ=255) gATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCa > 2:917547/1‑139 (MQ=255) tttGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGc > 2:1013592/1‑139 (MQ=255) tttGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGc > 2:748553/1‑139 (MQ=255) tGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAGCACTGaa < 1:1095973/101‑1 (MQ=255) tGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGaa > 2:1095973/1‑101 (MQ=255) gTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACt < 2:193539/97‑1 (MQ=255) gTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACt > 1:193539/1‑97 (MQ=255) tACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACt > 2:466947/1‑96 (MQ=255) tACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACt < 1:466947/96‑1 (MQ=255) tACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCAAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:609091/78‑1 (MQ=38) tACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCAAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 2:609091/1‑78 (MQ=38) ttGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGa < 1:1013592/139‑1 (MQ=255) tGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGAc < 1:1458608/139‑1 (MQ=255) tGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGAc < 1:917547/139‑1 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTaa > 2:977544/1‑56 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTaa < 1:977544/56‑1 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 2:1278262/1‑68 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:1278262/68‑1 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGa < 1:194261/110‑1 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGa > 2:194261/1‑110 (MQ=255) cAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGt > 2:1607532/1‑139 (MQ=255) aaCAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGa < 2:784022/83‑1 (MQ=255) aaCAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGa > 1:784022/1‑83 (MQ=255) aaCAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTa > 1:137643/1‑139 (MQ=255) aaCAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTa < 2:1589392/139‑1 (MQ=255) cAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGt > 2:536756/1‑139 (MQ=255) aaaaCCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCa < 1:1607532/139‑1 (MQ=255) aaaaCCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCa < 2:137643/139‑1 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca < 1:594691/51‑1 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGcaca > 2:594691/1‑51 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTGCGCGCAGAACGCGCAATTTCGGCACGAATTTTGAc < 2:1554679/120‑1 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCcgcg > 1:139676/1‑89 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCcgcg < 2:139676/89‑1 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGAc > 1:1554679/1‑120 (MQ=255) cgccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGa > 1:905946/1‑139 (MQ=255) gccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGCGCATAg > 2:1239126/1‑134 (MQ=255) gccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGCGCATAg < 1:1239126/134‑1 (MQ=255) ccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGt < 2:1458154/120‑1 (MQ=255) ccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGt > 1:1458154/1‑120 (MQ=255) ccgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGt < 1:748553/139‑1 (MQ=255) cgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTAtt > 2:412284/1‑122 (MQ=255) cgGAGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTAtt < 1:412284/122‑1 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCa < 1:1659338/94‑1 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCa > 2:124923/1‑94 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCa < 1:124923/94‑1 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCa > 2:1659338/1‑94 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTa < 2:351930/121‑1 (MQ=255) aGCGAGGTTTCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTa > 1:351930/1‑121 (MQ=255) tttCGTCAGTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAg > 1:276952/1‑139 (MQ=255) gTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtt < 1:794004/139‑1 (MQ=255) gTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtt < 1:536756/139‑1 (MQ=255) gTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtt < 2:790462/139‑1 (MQ=255) gTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtt < 2:905946/139‑1 (MQ=255) gTCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtt < 2:161321/139‑1 (MQ=255) tCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTAtt > 2:934492/1‑103 (MQ=255) tCGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTAtt < 1:934492/103‑1 (MQ=255) cGCCTACGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGtttt > 1:173495/1‑139 (MQ=255) | TTTATACAAGCACAGCTTTACAGGGGAGACAATGGAAAATTTTTCAGCAAGGGAAAATTGAGGGGTTGATCACGTTTTGTACTGAATTGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTCGTCAGTCGCCTGCGGCTGGTAACCGCAAAGCACACTGTATTATGTCAACACTGAAAGTATACGTGTTCCGCGCAGAACGCGCAATTTCGGCACGAATTTTGACGTATTTAGTGCATAGTTGAGTATCGATCACAGTTTGCGTTTT > NC_000913/3853021‑3853288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |