| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,377,189 | C→T | H105H (CAC→CAT) *178* (TAG→TAA) |
sugE → blc ← |
multidrug efflux system protein outer membrane lipoprotein cell division and growth lipocalin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,377,189 | 0 | C | T | 100.0% | 126.0 / NA | 40 | H105H (CAC→CAT) *178* (TAG→TAA) | sugE blc | multidrug efflux system protein outer membrane lipoprotein cell division and growth lipocalin |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (18/22); total (18/22) | |||||||||||
TGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAGTATCCACAGGTAGTCGCGG > NC_000913/4377056‑4377321 | tgtgGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCattaact > 2:1320868/1‑139 (MQ=255) cGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAgg < 1:943930/139‑1 (MQ=255) ttGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGgctgct > 1:1535530/1‑138 (MQ=255) ttGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGgctgct < 2:1535530/138‑1 (MQ=255) aGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCaa > 2:105007/1‑139 (MQ=255) aGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCaa > 1:738398/1‑139 (MQ=255) aGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCaa > 2:39785/1‑139 (MQ=255) ccATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACt < 2:824233/139‑1 (MQ=255) aCCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACAt < 1:39785/139‑1 (MQ=255) cATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAAc > 1:516218/1‑139 (MQ=255) cATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAAc < 2:65507/139‑1 (MQ=255) gctgctCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTcc < 1:1320868/139‑1 (MQ=255) tCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTg < 1:749050/139‑1 (MQ=255) ccGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGc > 1:609997/1‑139 (MQ=255) cGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGcc < 1:105007/139‑1 (MQ=255) tGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAgg < 1:669010/67‑1 (MQ=255) tGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAgg > 2:669010/1‑67 (MQ=255) aGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGt < 2:738398/139‑1 (MQ=255) tAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGt < 1:1549374/139‑1 (MQ=255) aTCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTg < 2:390233/139‑1 (MQ=255) tATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtc < 2:586467/107‑1 (MQ=255) tATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtc > 1:586467/1‑107 (MQ=255) tATTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGt > 2:927878/1‑139 (MQ=255) aTTGGGGATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTg < 2:609997/139‑1 (MQ=255) gggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtct > 1:807565/1‑103 (MQ=255) gggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCAtct < 2:807565/103‑1 (MQ=255) ggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCa > 2:206799/1‑96 (MQ=255) ggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCa < 1:206799/96‑1 (MQ=255) ggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCAc < 2:1066651/112‑1 (MQ=255) ggATTATTGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCGCCTGTTTCAc > 1:1066651/1‑112 (MQ=255) tattGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTcgcg > 2:1124465/1‑85 (MQ=255) tattGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTcgcg < 1:1124465/85‑1 (MQ=255) tattGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCa < 2:544124/92‑1 (MQ=255) tattGGTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCa > 1:544124/1‑92 (MQ=255) gTCTGAAACTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGCTGGCGTGCGGGAGAGTATCca > 1:1252068/1‑139 (MQ=255) gAAACTCAGCACTCATTAATTACCAGGCAGCTGTACACAAGTATAATAAACAG‑GATGAAACCCTTCCCGGATCGCTACTTCCTGCAGCTCCTGGTTCACTTTAACATAAATGGTTGGCGTGCGGGCGGGTATCCACCgg < 1:1251458/139‑1 (MQ=255) aaaCTCAGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAGTATCCACAGGt > 2:679810/1‑139 (MQ=255) aGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACt > 1:411306/1‑93 (MQ=255) aGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACt < 2:411306/93‑1 (MQ=255) aGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGga > 2:572254/1‑119 (MQ=255) aGCACTCATTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGga < 1:572254/119‑1 (MQ=255) cactcattAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAGTATCCACAGGTAGTCGCgg > 1:705268/1‑139 (MQ=255) | TGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATA‑AATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAGTATCCACAGGTAGTCGCGG > NC_000913/4377056‑4377321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |