| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,199,396 | C→T | pseudogene (75/948 nt) | yehH → | DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,199,396 | 0 | C | T | 100.0% | 78.1 / NA | 26 | pseudogene (75/948 nt) | yehH | DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (13/13); total (13/13) | |||||||||||
TTGCCGACATTGCCGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGCTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGA > NC_000913/2199268‑2199523 | ttGCCGACATTGCCGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCATTTTTGATGaaa < 1:863959/139‑1 (MQ=255) cGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGTATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGtt < 1:871040/139‑1 (MQ=255) ccGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCTCGGCAGTTCACCGTCAGTTTtgatga > 2:727273/1‑118 (MQ=255) ccGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTtgatga < 1:727273/118‑1 (MQ=255) cgcgAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGTCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGt > 1:855356/1‑139 (MQ=255) gcgAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGTCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTg < 2:855356/139‑1 (MQ=255) aGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCtt > 2:561142/1‑104 (MQ=255) aGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCtt < 1:561142/104‑1 (MQ=255) ttGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTATGCGTGATGTTTCCGGCAGCCGCCTGa < 2:911909/139‑1 (MQ=255) tGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGa < 1:1156952/138‑1 (MQ=255) tGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGa > 2:1156952/1‑138 (MQ=255) gggTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTtgtg < 2:1123952/105‑1 (MQ=255) gggTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTtgtg > 1:1123952/1‑105 (MQ=255) tCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAg < 2:1211846/102‑1 (MQ=255) tCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAg > 1:1211846/1‑102 (MQ=255) ggATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCgatgat > 2:483314/1‑139 (MQ=255) tAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAAcg > 2:1185889/1‑139 (MQ=255) aaCGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAAcgc > 2:3974/1‑139 (MQ=255) ttCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTtgatga > 2:218430/1‑51 (MQ=255) ttCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGTTTtgatga < 1:218430/51‑1 (MQ=255) ctgctgctgGACTTTCGCGCTTGGCAGTTCACCGTCAGTTTTGATTAAGCCTTAGATCCGTTTCTGCGTGATGTTTCCGGCAGCCGCCTGGAAGACCGGGCCTCGCCGTACAAAAGCGATTATGAAACGCGGGCGAACg < 1:699744/139‑1 (MQ=255) ctgGATTTTGGCCCACGGCAGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCgg > 2:530524/1‑139 (MQ=255) aGTTCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCt < 1:483314/139‑1 (MQ=255) ttCACCGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGa > 2:343627/1‑139 (MQ=255) cGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAAc < 1:932162/118‑1 (MQ=255) cGTCAGTTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAAc > 2:932162/1‑118 (MQ=255) | TTGCCGACATTGCCGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGCTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGA > NC_000913/2199268‑2199523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |