Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,764,608 | T→C | I182M (ATA→ATG) | yfjL ← | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,764,608 | 0 | T | C | 100.0% | 181.5 / NA | 51 | I182M (ATA→ATG) | yfjL | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (29/22); total (29/22) |
CATCAGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGTATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCATCGAT > NC_000913/2764478‑2764742 | catcaGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt < 1:925542/139‑1 (MQ=255) tgtgAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 2:736616/1‑139 (MQ=255) gTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt < 1:1167367/121‑1 (MQ=255) gTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCtt > 2:1167367/1‑121 (MQ=255) tCGAGAATGCTGGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGGTCCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGt > 1:447121/1‑139 (MQ=255) gagaATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTc > 2:559127/1‑139 (MQ=255) tCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCt > 1:1101189/1‑96 (MQ=255) tCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCt < 2:1101189/96‑1 (MQ=255) cAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGc > 1:554646/1‑139 (MQ=255) aGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 2:472645/1‑95 (MQ=255) aGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg < 1:472645/95‑1 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATc > 1:1089369/1‑83 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATc < 2:1089369/83‑1 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg > 2:714170/1‑88 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAg < 1:714170/88‑1 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa < 2:557293/134‑1 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa > 1:557293/1‑134 (MQ=255) ggCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGAt < 2:963669/139‑1 (MQ=255) cACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGaaaa > 2:952513/1‑113 (MQ=255) cACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGaaaa < 1:952513/113‑1 (MQ=255) gTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 2:1094399/139‑1 (MQ=255) cTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAAc > 2:1101828/1‑139 (MQ=255) gCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTta > 2:530819/1‑139 (MQ=255) cGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTc < 1:559127/139‑1 (MQ=255) aCTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGtt < 1:530819/139‑1 (MQ=255) gagaATGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTaaa > 1:472726/1‑139 (MQ=255) aaTGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa > 1:785853/1‑112 (MQ=255) aaTGACCCCATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 2:785853/112‑1 (MQ=255) cATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAAc > 1:125524/1‑106 (MQ=255) cATGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAAc < 2:125524/106‑1 (MQ=255) tGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGaaaa > 1:570937/1‑68 (MQ=255) tGTAGATCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGaaaa < 2:570937/68‑1 (MQ=255) aTCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTc < 1:669761/69‑1 (MQ=255) aTCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTc > 2:669761/1‑69 (MQ=255) aTCTTGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTttg > 1:459281/1‑139 (MQ=255) tGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGa > 1:255773/1‑139 (MQ=255) tGGGAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGa > 2:881110/1‑139 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa > 2:1145483/1‑48 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCa < 1:1145483/48‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa < 2:640296/77‑1 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa > 1:640296/1‑77 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAg > 2:363576/1‑139 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAg > 2:96840/1‑139 (MQ=255) gggAGGCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTCATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAg > 2:384409/1‑139 (MQ=255) ggCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTCATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCa < 1:384409/139‑1 (MQ=255) gCCAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCAt > 1:930006/1‑139 (MQ=255) ccAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa < 2:1194893/71‑1 (MQ=255) ccAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCa > 1:1194893/1‑71 (MQ=255) cAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa > 2:99659/1‑85 (MQ=255) cAGCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGaa < 1:99659/85‑1 (MQ=255) gCCGCATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCATCGAt < 1:1101828/139‑1 (MQ=255) | CATCAGCACTGTGAATGCGTCGAGAATGCTCGCCCTTGCGCGTCACAGTATCAAGGATGCGGCACCAAATGTCTTCGGCGACGGTTTCGGAACTGAGAATGACCCCATGTAGATCTTGGGAGGCCAGCCGTATGTTCTTGATCCCTAGAAGTTCCAGTTCGCGCAGGGATGAAAACACTTCCCATGTAGCCGCATCGATCCAATCTGAAACGCTTATACCTGAGTCTGTTAAAAAATTGTCTGTGCGTTTGTTGAGGTCATCGAT > NC_000913/2764478‑2764742 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |