Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 7,925 +A coding (35/1431 nt) yaaJ ← putative transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009137,9221.A100.0% 276.5 / NA 84W13L (TGG→TTG) yaaJputative transporter
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (38/46);  total (38/46)

GTTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAAC  >  NC_000913/7784‑8051
                                                                                                                                           |                                                                                                                                 
gTTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATcccc                                                                                                                                    >  2:1174189/1‑139 (MQ=255)
    aaCCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCaaaa                                                                                                                               >  1:1305885/1‑138 (MQ=255)
         ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCGTTACCGATCCCCAAAAGGACg                                                                                                                           <  1:477356/139‑1 (MQ=255)
         ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           <  2:1041434/139‑1 (MQ=255)
         ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           >  2:508740/1‑139 (MQ=255)
         ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           >  2:93244/1‑139 (MQ=255)
          cTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          >  1:1758770/1‑139 (MQ=255)
          cTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          >  2:542131/1‑139 (MQ=255)
                   gATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGa                                                                                                                 >  1:1789573/1‑139 (MQ=255)
                   gATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGa                                                                                                                 >  1:557798/1‑139 (MQ=255)
                     tGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAg                                                                                                               <  2:1789573/139‑1 (MQ=255)
                       aaTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGga                                                                                                             >  2:843573/1‑139 (MQ=255)
                        aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          <  1:1197949/125‑1 (MQ=255)
                        aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          >  2:1197949/1‑125 (MQ=255)
                        aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGgag                                                                                                            <  1:843573/139‑1 (MQ=255)
                           cTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCaaaagga                                                                                                                            <  2:214351/119‑5 (MQ=255)
                           cTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCaaaagga                                                                                                                            >  1:214351/1‑115 (MQ=255)
                             aTTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGaaaaa                                                                                                       >  2:1411691/1‑139 (MQ=255)
                                   aaGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTgg                                                                                                 <  1:93244/139‑1 (MQ=255)
                                   aaGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTgg                                                                                                 <  1:508740/139‑1 (MQ=255)
                                    aGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                <  2:557798/139‑1 (MQ=255)
                                       cTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGGCGCTGTTAATGAAGGAGAAAAAATCTGgcatg                                                                                             <  2:193868/139‑1 (MQ=255)
                                        ttttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           >  1:1597299/1‑108 (MQ=255)
                                        ttttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           <  2:1597299/108‑1 (MQ=255)
                                         tttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                           <  2:164262/139‑1 (MQ=255)
                                          ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgcatgcat                                                                                          >  2:1246072/1‑139 (MQ=255)
                                          ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                           <  1:932957/138‑1 (MQ=255)
                                          ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                           >  2:932957/1‑138 (MQ=255)
                                          ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCaaaagga                                                                                                                            >  1:1282239/1‑100 (MQ=255)
                                          ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCaaaagga                                                                                                                            <  2:1282239/104‑5 (MQ=255)
                                           tGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCata                                                                                         >  2:606101/1‑139 (MQ=255)
                                           tGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCata                                                                                         <  1:1411691/139‑1 (MQ=255)
                                            gCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCatat                                                                                        <  2:1421088/139‑1 (MQ=255)
                                                 aCTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCctc                                                                                   >  2:1683737/1‑139 (MQ=255)
                                                  cTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                <  1:724628/125‑1 (MQ=255)
                                                  cTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                >  2:724628/1‑125 (MQ=255)
                                                     gCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTAt                                                                               >  1:1759575/1‑139 (MQ=255)
                                                      cGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGaa                                                                                                                >  2:1488383/1‑105 (MQ=255)
                                                      cGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGaa                                                                                                                <  1:1488383/105‑1 (MQ=255)
                                                             aGCGAAACTGCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTc                                                                       >  1:1561187/1‑139 (MQ=255)
                                                                      gCACAAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACt                                                              <  2:1758770/139‑1 (MQ=255)
                                                                       cacaAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          >  1:549030/1‑78 (MQ=255)
                                                                       cacaAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGc                                                                                                                          <  2:549030/78‑1 (MQ=255)
                                                                       cacaAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                >  2:380936/1‑104 (MQ=255)
                                                                       cacaAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                <  1:380936/104‑1 (MQ=255)
                                                                         caAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                           <  2:1193847/139‑1 (MQ=255)
                                                                         caAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                           <  2:1305885/139‑1 (MQ=255)
                                                                         caAATCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                           <  2:1561187/139‑1 (MQ=255)
                                                                            aTCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcgc                                                                     <  2:1188468/126‑1 (MQ=255)
                                                                            aTCCGGTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcgc                                                                     >  1:1188468/1‑126 (MQ=255)
                                                                                 gTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                   >  2:1168627/1‑139 (MQ=255)
                                                                                 gTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                   <  2:970841/139‑1 (MQ=255)
                                                                                 gTGCGAAAAGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                   >  2:1409884/1‑139 (MQ=255)
                                                                                      aaaaGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                           >  1:971046/1‑126 (MQ=255)
                                                                                      aaaaGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                           <  2:971046/126‑1 (MQ=255)
                                                                                      aaaaGTGAGCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGtt                                              >  2:199192/1‑139 (MQ=255)
                                                                                           ttagccAACTACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATCGCCGGTCGCGATGACTATCCTGTGTAAACGTTACCaa                                         <  1:1106614/135‑1 (MQ=255)
                                                                                            gagccAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcgc                                                                     >  2:768817/4‑110 (MQ=255)
                                                                                            gagccAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcgc                                                                     <  1:768817/107‑1 (MQ=255)
                                                                                            gagccAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAAGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAAt                                        <  1:1174189/136‑1 (MQ=255)
                                                                                              gccAACAACCTGCGCCGAAGAGCAGATAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCTGGTCGCGa                                                                   <  1:1693838/109‑1 (MQ=255)
                                                                                              gccAACAACCTGCGCCGAAGAGCAGATAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCTGGTCGCGa                                                                   >  2:1693838/2‑110 (MQ=255)
                                                                                                   caacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaa                                 >  2:1782358/1‑139 (MQ=255)
                                                                                                    aacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaag                                <  1:542131/139‑1 (MQ=255)
                                                                                                    aacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaag                                <  1:874097/139‑1 (MQ=255)
                                                                                                     acCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTg                                                                                                  >  2:697594/1‑72 (MQ=255)
                                                                                                     acCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTg                                                                                                  <  1:697594/72‑1 (MQ=255)
                                                                                                     acCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                               <  1:1168627/139‑1 (MQ=255)
                                                                                                     acCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                               <  1:1782358/139‑1 (MQ=255)
                                                                                                        tGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGaa                                                                                                                >  2:1267020/1‑55 (MQ=255)
                                                                                                        tGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGaa                                                                                                                <  1:1267020/55‑1 (MQ=255)
                                                                                                         gcgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTgg                                                                                                 >  1:899259/1‑69 (MQ=255)
                                                                                                         gcgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTgg                                                                                                 <  2:899259/69‑1 (MQ=255)
                                                                                                         gcgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                   <  2:280388/115‑1 (MQ=255)
                                                                                                         gcgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                   >  1:280388/1‑115 (MQ=255)
                                                                                                            ccGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                               >  2:384101/1‑132 (MQ=255)
                                                                                                            ccGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                               <  1:384101/132‑1 (MQ=255)
                                                                                                             cGAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGGTTAAGAAGtatata                       <  2:1876641/139‑1 (MQ=255)
                                                                                                              gAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           >  2:219007/1‑38 (MQ=255)
                                                                                                              gAAGAGCAGGTAAATCATTACCGATCCCCAAAAGGACg                                                                                                                           <  1:219007/38‑1 (MQ=255)
                                                                                                                    cAGGTAAATCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACg                <  2:1759575/139‑1 (MQ=255)
                                                                                                                         aaaTCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAAt                                                                                                     >  1:1261845/1‑49 (MQ=255)
                                                                                                                         aaaTCATTACCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAAt                                                                                                     <  2:1261845/49‑1 (MQ=255)
                                                                                                                              agagacagccccaAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATCTATATCCCTCTTATTGCCGGTCGCTATGACTTTCCTGTGTCAACGTTACCACTTGTTTAAGAAGTATATACGCTACGAGGTACTTGAt     <  2:1194031/130‑1 (MQ=255)
                                                                                                                                 aCCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAAc                                                 <  2:974211/93‑1 (MQ=255)
                                                                                                                                 aCCGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAAc                                                 >  1:974211/1‑93 (MQ=255)
                                                                                                                                  ccGATCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGTTAAc  <  2:1483316/139‑1 (MQ=255)
                                                                                                                                     aTCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGc                                                                            >  2:38956/1‑62 (MQ=255)
                                                                                                                                     aTCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGc                                                                            <  1:38956/62‑1 (MQ=255)
                                                                                                                                     aTCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTAc          >  2:1003405/1‑128 (MQ=255)
                                                                                                                                     aTCCCCAAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTAc          <  1:1003405/128‑1 (MQ=255)
                                                                                                                                      ccccaAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGa               >  1:1766455/2‑121 (MQ=255)
                                                                                                                                           |                                                                                                                                 
GTTAAACCGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAAC  >  NC_000913/7784‑8051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: