| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,265,001 | 1086 bp→GAGG | [prfA] | [prfA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1265001 | 1266086 | 1086 | 41 [0] | [0] 37 | [prfA] | [prfA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1265000 | 0 (0.000) | 34 (0.470) +GAGG |
27/200 | 1.5 | 100% | intergenic (+30/‑12) | hemA/prfA | glutamyl tRNA reductase/peptide chain release factor RF‑1 |
| ? | NC_000913 | 1266087 = | 0 (0.000) | coding (1076/1083 nt) | prfA | peptide chain release factor RF‑1 | |||||
GCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGCCTTTGGTGA > NC_000913/1265958‑1266224 | tgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATg < 2:1597594‑M2/10‑1 (MQ=255)tgatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATg > 1:1625973‑M2/130‑139 (MQ=255) gatccatgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg < 2:1625973‑M2/11‑1 (MQ=255) gcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCa > 2:360792‑M2/122‑139 (MQ=255) aacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACt > 2:1353376‑M2/117‑139 (MQ=255) acgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTg < 1:1353376‑M2/24‑1 (MQ=255) acttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTg < 1:360792‑M2/32‑1 (MQ=255) tcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAg > 2:57234‑M2/105‑139 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaataat > 1:1200270‑M2/98‑106 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaataat < 2:1200270‑M2/9‑1 (MQ=255) cgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg > 1:1192328‑M2/96‑106 (MQ=255) cgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATgg < 2:1192328‑M2/11‑1 (MQ=255) cccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCaa > 2:689778‑M2/94‑139 (MQ=255) gaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAg < 1:689778‑M2/63‑1 (MQ=255) cctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCcgc > 2:438414‑M2/72‑139 (MQ=255) tgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCgcggcg > 1:93272‑M2/61‑132 (MQ=255) tgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCgcggcg < 2:93272‑M2/72‑1 (MQ=255) gcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCaa > 1:76094‑M2/60‑78 (MQ=255) gcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCaa < 2:76094‑M2/19‑1 (MQ=255) gctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGc < 2:509693‑M2/95‑1 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCctg < 2:333731‑M2/88‑1 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCctg > 1:333731‑M2/41‑128 (MQ=255) acagtacatcattttctttttttacagggtggaggAGGAATAATgg < 2:1141967‑M2/11‑1 (MQ=255) acagtacatcattttctttttttacagggtggaggAGGAATAATgg > 1:1141967‑M2/36‑46 (MQ=255) gtaaattattttcttttttttccggggggaggaAGGATTAAT‑GAAAAACAACACTGGTTAAGTGAAACAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCa < 2:1514234‑M2/106‑1 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGgc < 2:1262457‑M2/54‑1 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGgc > 1:1262457‑M2/31‑84 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGc < 2:1022768‑M2/95‑1 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGc > 1:1022768‑M2/31‑125 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCaga > 2:1277944‑M2/31‑139 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCaga > 1:758170‑M2/31‑139 (MQ=255) cattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGc > 1:1715901‑M2/27‑139 (MQ=255) tctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACt > 2:1619307‑M2/22‑139 (MQ=255) gggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGcc > 2:1107106‑M2/10‑139 (MQ=255) gaggAGGAATAATGGAATATCAACACTGGTTACGTGa < 1:1017991‑M2/33‑1 (MQ=255) gaggAGGAATAATGGAATATCAACACTGGTTACGTGa > 2:1017991‑M2/5‑37 (MQ=255) gAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGCCTTTGGTGa < 2:758170‑M2/138‑1 (MQ=255) | GCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGCCTTTGGTGA > NC_000913/1265958‑1266224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |