| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,614,614 | Δ3 bp | coding (681‑683/849 nt) | focB → | putative formate transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2614614 | 2614616 | 3 | 65 [0] | [0] 65 | focB | putative formate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2614613 | 0 (0.000) | 65 (0.880) | 45/204 | 0.4 | 100% | coding (680/849 nt) | focB | putative formate transporter |
| ? | NC_000913 | 2614617 = | 0 (0.000) | coding (684/849 nt) | focB | putative formate transporter | |||||
GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGT > NC_000913/2614481‑2614739 | attgcgggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaattcgtttgtgattccgttcgccattgccattcgccatttcgcccccca > 1:794051‑M2/137‑138 (MQ=255) ggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTg > 2:61283‑M2/131‑139 (MQ=255) ggcgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTg > 1:1549254‑M2/131‑139 (MQ=255) cgttcgttatgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccatttgccatttcgccccCCCCTTCTGGc < 2:1742878‑M2/11‑1 (MQ=255) atgcgacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGgcg < 2:741180‑M2/19‑1 (MQ=255) gacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGcaca < 2:293898‑M2/23‑1 (MQ=255) gacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGca > 2:661369‑M2/117‑137 (MQ=255) gacaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGca < 1:661369‑M2/21‑1 (MQ=255) acaaaatcgtcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAg > 2:1406356‑M2/116‑139 (MQ=255) tcgccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGa > 1:1869114‑M2/107‑139 (MQ=255) gccatgattttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACa > 1:1011515‑M2/105‑139 (MQ=255) tttgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCg < 1:40960‑M2/43‑1 (MQ=255) tgcccatcaccctttttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccCCCCTTCTGGCAGCTg < 1:801467‑M2/16‑1 (MQ=255) tgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccCCCCTTCTGGCAGCTg > 2:801467‑M2/96‑111 (MQ=255) tgcccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGc > 2:253619‑M2/95‑139 (MQ=255) cccatcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCAc > 2:387520‑M2/93‑139 (MQ=255) tcaccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGAc > 1:432903‑M2/89‑139 (MQ=255) ccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:253619‑M2/54‑1 (MQ=255) ccctgtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:387520‑M2/54‑1 (MQ=255) gtttgtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:992262‑M2/58‑1 (MQ=255) gtcgccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCAtt > 2:827112‑M2/78‑139 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTtta > 1:1708811‑M2/75‑139 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTtta > 1:1297973‑M2/75‑139 (MQ=255) gccagtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTtta > 1:124178‑M2/75‑139 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccc < 2:436041‑M2/2‑1 (MQ=255) gtggctttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgcccccc > 1:436041‑M2/71‑72 (MQ=255) ttgagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCaa < 2:1869114‑M2/75‑1 (MQ=255) gagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc < 1:679845‑M2/58‑1 (MQ=255) gagcactgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGc > 2:679845‑M2/63‑120 (MQ=255) actgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCt < 2:1421132‑M2/81‑1 (MQ=255) tgtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTcc > 1:837864‑M2/57‑139 (MQ=255) gtatcgccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTccc > 1:1389768‑M2/56‑139 (MQ=255) ccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACaa < 2:1738820‑M2/36‑1 (MQ=255) ccaatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACaa > 1:1738820‑M2/50‑85 (MQ=255) caatttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:1406356‑M2/91‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTg < 1:1231309‑M2/9‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTg > 2:1231309‑M2/47‑55 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 1:827112‑M2/93‑1 (MQ=255) atttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCt < 2:432903‑M2/93‑1 (MQ=255) atttgtttgtgattccgttcaccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 1:701292‑M2/14‑1 (MQ=255) atttgtttgtgattccgttcaccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 2:701292‑M2/47‑60 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc < 2:1876121‑M2/14‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGc > 1:1876121‑M2/45‑58 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTgg < 2:1708811‑M2/95‑1 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTgg > 2:628140‑M2/45‑139 (MQ=255) ttgtttgtgattccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTgg > 1:1622281‑M2/45‑139 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt > 2:230797‑M2/36‑113 (MQ=255) attccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCt < 1:230797‑M2/78‑1 (MQ=255) ttccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAAtattat > 1:910841‑M2/35‑139 (MQ=255) tccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 2:1629134‑M2/34‑87 (MQ=255) tccgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:1629134‑M2/54‑1 (MQ=255) cgttcgccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTGGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATcgg < 2:1619684‑M2/108‑1 (MQ=255) gccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:910841‑M2/113‑1 (MQ=255) gccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:1622281‑M2/113‑1 (MQ=255) gccattgccattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGgcggtg < 2:1297973‑M2/113‑1 (MQ=255) cattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 2:124178‑M2/121‑1 (MQ=255) cattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 1:1621140‑M2/121‑1 (MQ=255) cattcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTg < 2:837864‑M2/121‑1 (MQ=255) ttcgccatttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGt < 1:628140‑M2/123‑1 (MQ=255) tttcgccccCCCCTTGTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTttat > 1:1255284‑M2/10‑75 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt > 2:246461‑M2/10‑63 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGt < 1:246461‑M2/54‑1 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg > 2:1060569‑M2/10‑100 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATg < 1:1060569‑M2/91‑1 (MQ=255) tttcgccccCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAACTTTCCGGCACTGACGGTCAGCCATTttat < 2:1255284‑M2/66‑1 (MQ=255) | GCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGT > NC_000913/2614481‑2614739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |