| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 753,428 | C→T | A347A (GCG→GCA) | gltA ← | citrate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 753,428 | 0 | C | T | 97.6% | 262.3 / ‑2.3 | 84 | A347A (GCG→GCA) | gltA | citrate synthase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (41/41); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.32e-01 | |||||||||||
CAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTGACCGAAGCC > NC_000913/753294‑753562 | cAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGa > 1:809522/1‑139 (MQ=255) gCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATg < 1:299478/139‑1 (MQ=255) gCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATg < 1:467514/139‑1 (MQ=255) ccAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGt > 2:1436768/1‑139 (MQ=255) aaCGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGttt < 2:291631/139‑1 (MQ=255) ggTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTcc > 2:523883/1‑139 (MQ=255) gTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCa < 1:1436768/139‑1 (MQ=255) cGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCt > 1:358137/1‑139 (MQ=255) aTTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAg < 1:1124294/139‑1 (MQ=255) aTTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAg < 1:670859/139‑1 (MQ=255) aTTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAg < 1:523883/139‑1 (MQ=255) tGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGcc > 1:947790/1‑139 (MQ=255) gCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCa < 1:928644/139‑1 (MQ=255) tGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcag < 2:809522/139‑1 (MQ=255) gACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcagc < 1:1113113/139‑1 (MQ=255) tGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTc < 2:1253588/139‑1 (MQ=255) aaCATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCAt > 2:218876/1‑139 (MQ=255) aCGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCt < 2:1074622/132‑1 (MQ=255) aCGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCt > 1:1074622/1‑132 (MQ=255) aCGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGcc > 1:113406/1‑139 (MQ=255) aCGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGc < 2:1561112/138‑1 (MQ=255) aCGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGc > 1:1561112/1‑138 (MQ=255) ggAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTc < 2:551087/132‑1 (MQ=255) ggAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTc > 1:551087/1‑132 (MQ=255) ggAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa < 2:947790/139‑1 (MQ=255) ggAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 2:1359501/1‑139 (MQ=255) gAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcagc > 2:1654980/1‑119 (MQ=255) gAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcagc < 1:1654980/119‑1 (MQ=255) gAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 1:1513981/1‑139 (MQ=255) aaTACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCGCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc < 1:1191620/139‑1 (MQ=255) agcGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCTAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCa > 1:1129089/3‑139 (MQ=255) tCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGTGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTGAg < 1:1802489/139‑1 (MQ=255) tCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAg < 1:547596/139‑1 (MQ=255) tCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAg < 1:1621736/139‑1 (MQ=255) gCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGCGCGa < 1:1375290/79‑1 (MQ=255) gCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGCGCGa > 2:1375290/1‑79 (MQ=255) tCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTc > 1:709083/1‑139 (MQ=255) cAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTcc < 2:1773873/82‑1 (MQ=255) cAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTcc > 1:1773873/1‑82 (MQ=255) gatACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAg > 1:7882/1‑139 (MQ=255) aCCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGtt > 2:276189/1‑139 (MQ=255) agagTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCa < 2:908570/139‑1 (MQ=255) agTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg > 1:918244/1‑139 (MQ=255) agTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg < 1:218876/139‑1 (MQ=255) gAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcag < 1:597452/84‑1 (MQ=255) gAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCcag > 2:597452/1‑84 (MQ=255) aaaTCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAg < 2:999424/113‑1 (MQ=255) aaaTCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAg > 1:999424/1‑113 (MQ=255) aTCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACg > 1:925530/1‑139 (MQ=255) gACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAg < 1:16070/68‑1 (MQ=255) gACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAg > 2:16070/1‑68 (MQ=255) cGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc < 2:941083/98‑1 (MQ=255) cGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGc > 1:941083/1‑98 (MQ=255) tCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTCCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGgcgcg < 2:1129089/139‑1 (MQ=255) ggTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGc < 1:260371/111‑1 (MQ=255) ggTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGc > 2:260371/1‑111 (MQ=255) cAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCg > 1:124235/1‑139 (MQ=255) aGTTTCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGt < 2:7882/139‑1 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATg > 1:1868019/1‑37 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATg < 2:1868019/37‑1 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACt > 2:1479929/1‑58 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACt < 1:1479929/58‑1 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa < 1:515206/83‑1 (MQ=255) tttCTTCTCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 2:515206/1‑83 (MQ=255) cttctCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg < 2:951553/81‑1 (MQ=255) cttctCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 1:951553/1‑81 (MQ=255) ttctCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg < 1:933566/110‑1 (MQ=255) ttctCGATAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg > 2:933566/1‑110 (MQ=255) aTAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTaca > 2:562153/1‑139 (MQ=255) aTAAAGTACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTaca > 2:934764/1‑139 (MQ=255) tACGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGt < 2:113406/139‑1 (MQ=255) aCGGGTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGAACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTg > 1:1351385/1‑139 (MQ=255) ggTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTGAcc < 2:358137/139‑1 (MQ=255) gTCGTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTGACCg > 2:957615/1‑139 (MQ=255) gTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg < 1:1362705/90‑1 (MQ=255) gTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACg > 2:1362705/1‑90 (MQ=255) gTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGTCGCGCGGGTCGTAA‑TTTTTg < 2:1279152/121‑1 (MQ=255) gTTCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTg > 1:1279152/1‑121 (MQ=255) ttCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa > 2:1309719/1‑58 (MQ=255) ttCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCa < 1:1309719/58‑1 (MQ=255) ttCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg > 2:743615/1‑59 (MQ=255) ttCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAg < 1:743615/59‑1 (MQ=255) tCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAATTTTTTGTACACGCGGTGACCGAAGc > 1:754578/1‑139 (MQ=255) tCAGTGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTGACCGAAGcc > 2:471384/1‑139 (MQ=255) | CAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATACCAGAGTAGAAATCGACGTTCGGGTACAGTTTCTTCTCGATAAAGTACGGGTCGTTCAGCGCGATGTTTTCCAGCTCCATAGCCACTTCCAGCAGGTCATCCTTCGTGCCCAGCTCTTTCAGCACTTCATGGCAGGTTTCACGCATTACGGTGGCGCGCGGGTCGTAA‑TTTTTGTACACGCGGTGACCGAAGCC > NC_000913/753294‑753562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |