Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,275,815	T→C	E5E (GAA→GAG)	narL ←	response regulator in two‑component regulatory system with NarX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,275,815	0	T	C	100.0%	259.4 / NA	74	E5E (GAA→GAG)	narL	response regulator in two‑component regulatory system with NarX
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/38);  total (36/38)

ACTCCGCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCG  >  NC_000913/1275682‑1275950                                                                                                                                      |                                                                                                                                           aCTCCGCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTg                                                                                                                                       >  2:1811412/1‑139 (MQ=255)  cTCCGCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGa                                                                                                                                      >  1:864467/1‑139 (MQ=255)   tCCGCCAGTTCAATACCCTGTTCGCCATCACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGAt                                                                                                                                     >  2:1165698/1‑139 (MQ=255)     cGCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTa                                                                                                                                   >  2:696508/1‑139 (MQ=255)      gCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTAc                                                                                                                                  >  1:1475047/1‑139 (MQ=255)        cAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGGCAGTTCGCAGCATCGGGTGATCGTCAATCAGCGGGATAGTAGCCGGCTCCTGATTACTc                                                                                                                                <  2:1413685/139‑1 (MQ=255)         aGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCa                                                                                                                               <  1:1811412/139‑1 (MQ=255)              aaTACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGt                                                                                                                          <  1:343291/139‑1 (MQ=255)                tACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        <  1:789265/139‑1 (MQ=255)                tACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        <  2:1475047/139‑1 (MQ=255)                       ttCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        >  1:1285928/1‑132 (MQ=255)                       ttCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        <  2:1285928/132‑1 (MQ=255)                       ttCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTg                                                                                                                 >  1:1556762/1‑139 (MQ=255)                          gCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAACAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        >  1:78885/1‑129 (MQ=255)                          gCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAACAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        <  2:78885/129‑1 (MQ=255)                                 cTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCtgtg                                                                                                       >  2:721914/1‑139 (MQ=255)                                      ttCGCCAACCACGGTGATGTCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGt                                                                                                  >  1:516198/1‑139 (MQ=255)                                      ttCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        >  1:722224/1‑117 (MQ=255)                                      ttCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTAt                                                                                                                        <  2:722224/117‑1 (MQ=255)                                      ttCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGt                                                                                                  >  2:846344/1‑139 (MQ=255)                                        cGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGttt                                                                                                >  1:1145932/1‑139 (MQ=255)                                            aaCCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTc                                                                                            <  1:381105/139‑1 (MQ=255)                                               cACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCggg                                                                                         <  2:864467/139‑1 (MQ=255)                                                   gTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGt                                                                                                                          <  2:1050684/102‑1 (MQ=255)                                                   gTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGt                                                                                                                          >  1:1050684/1‑102 (MQ=255)                                                      atatCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑g                                                                               <  1:1184068/139‑1 (MQ=255)                                                       tatCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGt                                                                                                                          >  2:1359411/1‑98 (MQ=255)                                                       tatCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGt                                                                                                                          <  1:1359411/98‑1 (MQ=255)                                                           tGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGac                                                                          <  2:1145932/139‑1 (MQ=255)                                                              tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATaa                                                                                    >  1:635871/1‑129 (MQ=255)                                                              tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATaa                                                                                    <  2:635871/129‑1 (MQ=255)                                                              tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGaccac                                                                       <  2:1556762/139‑1 (MQ=255)                                                                   tACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGGTTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACtt                                                                  >  2:96056/1‑139 (MQ=255)                                                                       gATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCa                                                                                                                               <  2:652690/77‑1 (MQ=255)                                                                       gATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCa                                                                                                                               >  1:652690/1‑77 (MQ=255)                                                                        aTAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCTTGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCCCTTCGGTg                                                             >  1:1826433/1‑139 (MQ=255)                                                                          aaGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGcc                                                           <  2:1595270/139‑1 (MQ=255)                                                                             cTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGAt                                                                                                                                     <  1:854497/65‑1 (MQ=255)                                                                             cTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGAt                                                                                                                                     >  2:854497/1‑65 (MQ=255)                                                                                     cGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGTGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCac                                                >  2:66202/1‑139 (MQ=255)                                                                                          gTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGAcgg                                           >  2:1612675/1‑139 (MQ=255)                                                                                           ttCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGAcggc                                          <  1:696508/139‑1 (MQ=255)                                                                                             cGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTc                                                                                            >  2:290445/1‑90 (MQ=255)                                                                                             cGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTc                                                                                            <  1:290445/90‑1 (MQ=255)                                                                                                agcaTCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGAcg                                     <  1:1612675/139‑1 (MQ=255)                                                                                                     cGGGTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCa                                >  1:859132/1‑139 (MQ=255)                                                                                                      gggTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCaa                               >  1:1037558/1‑139 (MQ=255)                                                                                                       ggTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAAt                              >  1:934039/1‑139 (MQ=255)                                                                                                        gTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             <  1:1211013/139‑1 (MQ=255)                                                                                                        gTGATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             <  2:934039/139‑1 (MQ=255)                                                                                                          gATCGTCAATTAGCATGATAGTAGCCGGCTTCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGc                           <  1:66202/139‑1 (MQ=255)                                                                                                          gATCGTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGc                           <  1:1165698/139‑1 (MQ=255)                                                                                                              gTCAATCAGCAGGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCg                       >  1:581688/1‑139 (MQ=255)                                                                                                                      gcagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACttt               >  1:1610759/1‑139 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGaccac                                                                       <  1:1202114/82‑1 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGaccac                                                                       <  1:864272/82‑1 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGaccac                                                                       >  2:864272/1‑82 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGaccac                                                                       >  2:1202114/1‑82 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             <  2:492756/124‑1 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             >  1:492756/1‑124 (MQ=255)                                                                                                                       cagGATAGTAGCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTg              >  1:49019/1‑139 (MQ=255)                                                                                                                           aTAGTAGCCGGCTCCTGATTACTCATGGGTATTTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCa          <  2:1826433/139‑1 (MQ=255)                                                                                                                               tagCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             <  2:449240/116‑1 (MQ=255)                                                                                                                               tagCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                             >  1:449240/1‑116 (MQ=255)                                                                                                                               tagCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGAt      >  1:1363846/1‑139 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTgcg            >  1:957841/1‑134 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTgcg            <  2:957841/134‑1 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg    <  2:1037558/139‑1 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg    <  2:516198/139‑1 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg    <  2:1610759/139‑1 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg    >  1:329688/1‑139 (MQ=255)                                                                                                                                 gCCGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg    <  2:1363846/139‑1 (MQ=255)                                                                                                                                  ccGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgc   <  1:96056/139‑1 (MQ=255)                                                                                                                                   cGGCTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCAACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg  <  1:558635/139‑1 (MQ=255)                                                                                                                                      |                                                                                                                                           ACTCCGCCAGTTCAATACCCTGTTCGCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAA‑‑‑GGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCG  >  NC_000913/1275682‑1275950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑