| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,624,029 | T→C | intergenic (‑179/+76) | dgcZ ← / ← ydeI | diguanylate cyclase, zinc‑sensing/hydrogen peroxide resistance OB fold protein, putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,624,029 | 0 | T | C | 100.0% | 211.2 / NA | 60 | intergenic (‑179/+76) | dgcZ/ydeI | diguanylate cyclase, zinc‑sensing/hydrogen peroxide resistance OB fold protein, putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (29/31); total (29/31) | |||||||||||
AGAAAAGCAAAATTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGTAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATCCAGACT > NC_000913/1623896‑1624161 | agaAAAGCAAAATTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATATCATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGcaaata > 1:1225348/1‑139 (MQ=255)agaAAAGCAAAATTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGcaaata > 1:358920/1‑139 (MQ=255) aGCAAAATTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAgg < 2:1313231/139‑1 (MQ=255) aaaaTTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATg < 1:940138/139‑1 (MQ=255) cAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCa < 2:1107906/139‑1 (MQ=255) aaGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCAt < 2:689545/119‑1 (MQ=255) aaGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCAt > 1:689545/1‑119 (MQ=255) ttATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCag < 1:178743/139‑1 (MQ=255) aTGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCag > 2:426880/1‑137 (MQ=255) aTGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCag < 1:426880/137‑1 (MQ=255) aTCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCGAATAAAAGGATGACaaa > 2:1000692/1‑101 (MQ=255) aTCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACaaa < 1:1000692/101‑1 (MQ=255) tctcTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCa < 2:534976/105‑1 (MQ=255) tctcTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCa > 1:534976/1‑105 (MQ=255) tctcTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAAt > 2:708286/1‑114 (MQ=255) tctcTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAAt < 1:708286/114‑1 (MQ=255) tctcTGAGATAACATTGTGAATTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATCGCCCAGTAGTTCAGGc > 2:1275035/1‑139 (MQ=255) ctGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCAt < 1:1275035/139‑1 (MQ=255) agaTAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCCTCAg > 1:1862918/1‑139 (MQ=255) cATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAat > 2:1666055/1‑139 (MQ=255) aTTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAatt < 2:1225348/139‑1 (MQ=255) ttGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAgg < 1:298306/132‑1 (MQ=255) ttGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAgg > 2:298306/1‑132 (MQ=255) gtgATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAgg < 1:1665144/76‑1 (MQ=255) gtgATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAgg > 2:1665144/1‑76 (MQ=255) aTTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATaaaa < 1:1147349/71‑1 (MQ=255) aTTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATaaaa > 2:1147349/1‑71 (MQ=255) aTTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAAtttatttt > 1:667786/1‑139 (MQ=255) tAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATgg > 1:1549833/1‑102 (MQ=255) tAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATgg < 2:1549833/102‑1 (MQ=255) tAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAAtttatttttat > 1:1588621/1‑139 (MQ=255) aGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCa > 2:1769564/1‑94 (MQ=255) aGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCa < 1:1769564/94‑1 (MQ=255) cGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGt < 2:689493/139‑1 (MQ=255) gtTTAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAacgacg > 1:1648836/1‑139 (MQ=255) tttAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATgg > 1:549093/1‑74 (MQ=255) tttAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATgg < 2:549093/74‑1 (MQ=255) tttAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGAcgg > 1:1681553/1‑139 (MQ=255) ttAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCa < 1:1508957/54‑1 (MQ=255) ttAATTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCa > 2:1508957/1‑54 (MQ=255) aTTCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGAcggccgg < 2:667786/139‑1 (MQ=255) tCTGTAAATTACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGgcg < 2:1588621/139‑1 (MQ=255) tACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCt > 2:1576710/1‑100 (MQ=255) tACCTCTGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCt < 1:1576710/100‑1 (MQ=255) ctGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATttatttttattt > 2:1737519/1‑93 (MQ=255) ctGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATttatttttattt < 1:1737519/93‑1 (MQ=255) ctGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATcc > 2:623394/1‑139 (MQ=255) ctGCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATcc > 2:1749150/1‑139 (MQ=255) gCATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATCCAg < 2:1137217/139‑1 (MQ=255) cagtATCGCAATTAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAg > 1:1089098/4‑64 (MQ=255) cATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAg < 2:1089098/64‑1 (MQ=255) cATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCa < 2:1121566/95‑1 (MQ=255) cATTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCa > 1:1121566/1‑95 (MQ=255) aTTATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATCCAGAc < 1:623394/139‑1 (MQ=255) ttATCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATCCAGACt < 2:358920/139‑1 (MQ=255) aTCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCAt > 2:1824439/1‑65 (MQ=255) aTCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCAt < 1:1824439/65‑1 (MQ=255) tCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATg > 2:404048/1‑45 (MQ=255) tCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATg < 1:404048/45‑1 (MQ=255) tCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAat > 2:522014/1‑73 (MQ=255) tCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAat < 1:522014/73‑1 (MQ=255) tCGCAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGAcggccg > 1:586988/1‑114 (MQ=255) | AGAAAAGCAAAATTACGTCAATATTTTCATAGAAATCCGAAGTTATGAGTCATCTCTGAGATAACATTGTGATTTAAAACAAAATCAGCGGATAAAAAAGTGTTTAATTCTGTAAATTACCTCTGCATTATCGTAAATAAAAGGATGACAAATAGCATAACCCAATACCCTAATGGCCCAGTAGTTCAGGCCATCAGGCTAATTTATTTTTATTTCTGCAAATGAGTGACCCGAACGACGGCCGGCGCGCTTTTCTTATCCAGACT > NC_000913/1623896‑1624161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |