Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,757,006 | G→A | A437T (GCT→ACT) | pykF → | pyruvate kinase I |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,757,006 | 0 | G | A | 100.0% | 239.9 / NA | 74 | A437T (GCT→ACT) | pykF | pyruvate kinase I |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (34/40); total (34/40) |
ATGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAAT > NC_000913/1756875‑1757130 | aTGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCa > 1:1716063/1‑139 (MQ=255) aTGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCa > 1:1683138/1‑139 (MQ=255) gCCACCATCCTGGCACTGGCCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCaga < 2:217933/139‑1 (MQ=255) gCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCaga < 2:767339/139‑1 (MQ=255) ccaccaTCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGGACTGAGCAATGGCGATGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGTTTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCagag < 1:1226332/139‑1 (MQ=255) caTCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGt < 1:1859859/139‑1 (MQ=255) caTCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGt < 2:365412/139‑1 (MQ=255) ccTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTg < 1:1337754/139‑1 (MQ=255) cTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTgg < 2:1683138/139‑1 (MQ=255) tGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGc > 2:951665/1‑139 (MQ=255) gACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACaaa > 1:133423/1‑139 (MQ=255) accaccAACGAAAGAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACaaa > 1:1874814/1‑139 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCagag < 1:857212/122‑1 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAg > 2:74077/1‑139 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAg > 2:211302/1‑139 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAg > 1:1758658/1‑139 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAg > 1:1296736/1‑139 (MQ=255) accaccAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTAATGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCagag > 2:857212/1‑122 (MQ=255) aaCGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACg < 2:1867720/139‑1 (MQ=255) gAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGATGTTg < 1:978697/139‑1 (MQ=255) cTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGt < 2:1875242/139‑1 (MQ=255) cTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGt < 1:951665/139‑1 (MQ=255) ttGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTg < 2:1613590/139‑1 (MQ=255) gAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTgg < 2:648052/129‑1 (MQ=255) gAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTgg > 1:648052/1‑129 (MQ=255) gCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCa > 1:1851041/1‑82 (MQ=255) gCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCa < 2:1851041/82‑1 (MQ=255) gCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTAcc > 2:748985/1‑139 (MQ=255) gCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTAcc > 2:180007/1‑139 (MQ=255) aaGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAg < 2:10490/139‑1 (MQ=255) aaGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAg < 1:180007/139‑1 (MQ=255) ttGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCagag > 1:1284246/1‑76 (MQ=255) ttGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCagag < 2:1284246/76‑1 (MQ=255) ttGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCac > 1:792664/1‑139 (MQ=255) gtgCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGa > 1:1587061/1‑95 (MQ=255) gtgCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGa > 1:1370964/1‑95 (MQ=255) gtgCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGa < 2:1587061/95‑1 (MQ=255) gtgCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGa < 2:1370964/95‑1 (MQ=255) ttAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCAt < 2:1874814/139‑1 (MQ=255) ttAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATc < 2:133423/139‑1 (MQ=255) gagaTCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTc < 2:792664/139‑1 (MQ=255) aTCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACg < 1:74077/139‑1 (MQ=255) aTCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACg < 2:1716063/139‑1 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACTAAGGTGACGTTGTAGTTATGGTTTCTgg > 2:1011481/1‑93 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAATGTGACGtt > 1:1098038/1‑76 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGtt < 2:1098038/76‑1 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTgg < 1:1011481/93‑1 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCa < 1:174932/127‑1 (MQ=255) cACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCa > 2:174932/1‑127 (MQ=255) cTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCa > 1:53855/1‑89 (MQ=255) cTGATGATTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCa < 2:53855/89‑1 (MQ=255) gatgatTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACAGCATCTGTTCACGTCCTGTAATAtt > 2:1044636/1‑139 (MQ=255) atgatTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTg > 2:1723878/1‑139 (MQ=255) gatTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTc > 1:817735/1‑121 (MQ=255) gatTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTc < 2:817735/121‑1 (MQ=255) gatTTCTACCGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCt > 1:1540247/1‑139 (MQ=255) ccGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaa < 1:211302/139‑1 (MQ=255) ccGTCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaa < 2:1758658/139‑1 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGcacac < 2:824686/40‑1 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGcacac > 1:824686/1‑40 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACg < 2:656290/50‑1 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACg > 1:656290/1‑50 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCa > 1:1460079/1‑111 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCa < 2:1460079/111‑1 (MQ=255) tCT‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaatta > 1:1417434/1‑139 (MQ=255) t‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGc > 2:63964/1‑86 (MQ=255) t‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGc < 1:63964/86‑1 (MQ=255) t‑GGGTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaattaat < 2:1540247/139‑1 (MQ=255) gggTAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGc < 2:1208921/85‑1 (MQ=255) gggCAAAGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTCCCGAGCGGc > 1:1208921/1‑85 (MQ=255) aGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAg < 2:223228/75‑1 (MQ=255) aGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAg > 1:223228/1‑75 (MQ=255) aGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTaa < 2:490141/87‑1 (MQ=255) aGAACTGACTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTaa > 1:490141/1‑87 (MQ=255) | ATGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCT‑GGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAAT > NC_000913/1756875‑1757130 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |