Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,297,668 | C→T | D567N (GAC→AAC) | fdhF ← | formate dehydrogenase‑H, selenopolypeptide subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,297,668 | 0 | C | T | 100.0% | 230.5 / NA | 71 | D567N (GAC→AAC) | fdhF | formate dehydrogenase‑H, selenopolypeptide subunit |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (36/35); total (36/35) |
TGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCC > NC_000913/4297543‑4297798 | tgCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTAcc > 2:676378/1‑139 (MQ=255) aGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑c > 2:1034221/1‑139 (MQ=255) ccAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGc > 2:1272133/1‑139 (MQ=255) ggTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAgg > 1:63210/1‑139 (MQ=255) gTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGAt > 2:1759757/1‑118 (MQ=255) gTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGAt < 1:1759757/118‑1 (MQ=255) tcaGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaaga > 1:818754/1‑139 (MQ=255) cagccagcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa < 2:818754/139‑1 (MQ=255) cagccagcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa > 1:720952/1‑139 (MQ=255) cagccagcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa < 1:765840/139‑1 (MQ=255) cagcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCa > 1:1856932/1‑120 (MQ=255) cagcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCa < 2:1856932/120‑1 (MQ=255) agcGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTgcg < 2:63210/139‑1 (MQ=255) gccgccAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCa > 1:1607496/1‑139 (MQ=255) cgccAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGa < 2:1453641/139‑1 (MQ=255) gCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCg < 2:145345/139‑1 (MQ=255) cacaGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGa < 1:827397/128‑1 (MQ=255) cacaGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGa > 2:827397/1‑128 (MQ=255) acaGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTa > 2:715894/1‑139 (MQ=255) ccGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACt < 1:1034221/139‑1 (MQ=255) ccGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACt < 2:1607496/139‑1 (MQ=255) cATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGTCGCGCAGGTGAAGAACTGCGCCAGACCGTTCgggg > 2:1167431/1‑127 (MQ=255) cATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGTCGCGCAGGTGAAGAACTGCGCCAGACCGTTCgggg < 1:1167431/127‑1 (MQ=255) tCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCttt > 2:481412/1‑139 (MQ=255) aaCGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTaaa < 2:720952/139‑1 (MQ=255) agagTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATaa > 1:1705032/1‑139 (MQ=255) gagTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATaag < 1:715894/139‑1 (MQ=255) gtagtGACCAACTTCACGCACCGTTGATAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATaagaa < 1:3878/139‑1 (MQ=255) tGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACt < 1:1032903/115‑1 (MQ=255) tGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACt > 2:1032903/1‑115 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGTTACTCGTCGGTGAGTTTGTTGATCGGCGCTACCCAGC‑‑AGCAGGTGAAGAAATGCGTCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACGGATAAGAAGTCCCCTGa > 1:664430/1‑139 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa < 1:628604/81‑1 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa > 2:628604/1‑81 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCg > 2:1676907/1‑98 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCg < 1:256011/98‑1 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCg > 2:256011/1‑98 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCg < 1:1676907/98‑1 (MQ=255) aaCTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGa > 2:1795833/1‑139 (MQ=255) cTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATc > 2:686126/1‑139 (MQ=255) cACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGc < 1:1795833/139‑1 (MQ=255) cACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGc < 1:1272133/139‑1 (MQ=255) aCAGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATc > 2:643426/1‑139 (MQ=255) aGTACCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATcgc < 1:686126/139‑1 (MQ=255) aCCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATc > 1:1806265/1‑119 (MQ=255) aCCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATc < 2:1806265/119‑1 (MQ=255) aCCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGc > 2:460147/1‑139 (MQ=255) aCCATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGc < 2:1786769/139‑1 (MQ=255) cATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAg > 2:1274575/1‑99 (MQ=255) cATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGAt < 2:448944/101‑1 (MQ=255) cATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGAt > 1:448944/1‑101 (MQ=255) cATCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGCGGTATCAAACTTCTCTTTAAACAg < 1:1274575/99‑1 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAg > 1:1612858/1‑64 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAg < 2:1612858/64‑1 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAgg < 2:369034/139‑1 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAgg > 2:1531730/1‑139 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAgg > 1:685261/1‑139 (MQ=255) tCGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAgg < 1:643426/139‑1 (MQ=255) cGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATaagaa < 2:1569967/103‑1 (MQ=255) cGGGTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATaagaa > 1:1569967/1‑103 (MQ=255) ggTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCTAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGc < 1:1241801/115‑1 (MQ=255) ggTACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTGTAAACAGATAAGAAGTCCCCTGATCGGc > 2:1241801/1‑115 (MQ=255) tACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGa < 2:264860/60‑1 (MQ=255) tACTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGa > 1:264860/1‑60 (MQ=255) cTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTga > 1:1278855/1‑44 (MQ=255) cTCGTCGGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTga < 2:1278855/44‑1 (MQ=255) gtcgGTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACtgaatg > 1:447611/1‑139 (MQ=255) gTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCgg > 2:1056634/1‑120 (MQ=255) gTGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCgg < 1:1056634/120‑1 (MQ=255) tGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa > 2:166051/1‑40 (MQ=38) tGAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTgaagaa < 1:166051/40‑1 (MQ=38) gAGTTTGTTGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGccc < 2:685261/139‑1 (MQ=255) | TGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGT‑‑CGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAGAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCC > NC_000913/4297543‑4297798 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |