Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,508,454 Δ1 bp coding (137/879 nt) php ← phosphotriesterase homology protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,508,4510C.98.6% 292.1 / ‑2.1 71coding (140/879 nt)phpphosphotriesterase homology protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base . (34/36);  minor base A (0/1);  total (34/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

CATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAA  >  NC_000913/3508314‑3508583
                                                                                                                                         |                                                                                                                                    
caTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGcc                                                                                                                                     >  1:753963/1‑139 (MQ=255)
  tGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGcccg                                                                                                                                   <  2:46254/139‑2 (MQ=255)
             aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGt                                                                                                                       <  1:842456/139‑1 (MQ=255)
              aaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTc                                                                                                                      >  1:925769/1‑139 (MQ=255)
              aaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTc                                                                                                                      >  2:1167100/1‑139 (MQ=255)
                               aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGcc                                                                                                                                     >  1:42364/1‑108 (MQ=255)
                               aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGcc                                                                                                                                     <  2:42364/108‑1 (MQ=255)
                               aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCaaa                                                                                                     <  2:1029046/139‑1 (MQ=255)
                               aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCaaa                                                                                                     >  2:1025163/1‑139 (MQ=255)
                                 cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATg                                                                                                   <  1:380999/139‑1 (MQ=255)
                                   gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa                                                                                                 >  1:1089503/1‑139 (MQ=255)
                                   gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa                                                                                                 >  1:224654/1‑139 (MQ=255)
                                    tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  1:1090834/139‑1 (MQ=255)
                                        ggCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCAt                                                                                            >  1:333255/1‑139 (MQ=255)
                                         gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  1:524974/134‑1 (MQ=255)
                                         gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  2:524974/1‑134 (MQ=255)
                                         gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa                                                                                           >  2:270346/1‑139 (MQ=255)
                                         gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa                                                                                           <  1:1167100/139‑1 (MQ=255)
                                              cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  2:217806/129‑1 (MQ=255)
                                              cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  1:217806/1‑129 (MQ=255)
                                                 gTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATGGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCACTCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAATTGAACGCATACTGATCaa                                                                                   <  2:950688/139‑1 (MQ=255)
                                                     aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg                                                                               >  1:976416/1‑139 (MQ=255)
                                                           gTCTCGCGCATTACATCATGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg                                                                                 >  1:854255/1‑131 (MQ=255)
                                                           gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTCACGGTTGGTCATCTCAATCACATTGCGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg                                                                                 <  2:854255/131‑1 (MQ=255)
                                                               cgcgCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACg                                                                     <  2:1089503/139‑1 (MQ=255)
                                                                 cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  1:1174527/110‑1 (MQ=255)
                                                                 cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  2:1174527/1‑110 (MQ=255)
                                                                 cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt                                                                   <  2:976416/139‑1 (MQ=255)
                                                                 cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt                                                                   >  1:917347/1‑139 (MQ=255)
                                                                     ttACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAgg                                                                                                                        <  1:159490/82‑1 (MQ=255)
                                                                     ttACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAgg                                                                                                                        >  2:159490/1‑82 (MQ=255)
                                                                      tACATCAAGCTTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg                                                                              <  2:236611/123‑1 (MQ=255)
                                                                      tACATCAAGCTTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg                                                                              >  1:236611/1‑123 (MQ=255)
                                                                      tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGCTCAAGGCGGCAGTCCACGTTGtttt                                                              >  2:781495/1‑139 (MQ=255)
                                                                           cAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACACCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAg                                                         <  2:1154984/139‑1 (MQ=255)
                                                                              gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGTACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg                                                      <  2:917347/139‑1 (MQ=255)
                                                                                aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAgg                                                                                                                        <  2:399017/71‑1 (MQ=255)
                                                                                aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAgg                                                                                                                        >  1:399017/1‑71 (MQ=255)
                                                                                  aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga                                                  <  2:978955/139‑1 (MQ=255)
                                                                                   aaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgagag                                                 >  1:1122617/1‑139 (MQ=255)
                                                                                     ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt                                               <  1:1025163/139‑1 (MQ=255)
                                                                                     ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt                                               <  2:224654/139‑1 (MQ=255)
                                                                                     ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt                                               <  1:781495/139‑1 (MQ=255)
                                                                                        cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCGCGCCCGGGTCATCAGGTCGTTc                                                                                                                  <  2:812927/69‑1 (MQ=255)
                                                                                        cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTc                                                                                                                  >  1:812927/1‑69 (MQ=255)
                                                                                        cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt                                               <  1:393839/136‑1 (MQ=255)
                                                                                        cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt                                               >  2:393839/1‑136 (MQ=255)
                                                                                        cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa                                            >  1:691707/1‑139 (MQ=255)
                                                                                         gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAg                                                                                                                         >  1:321250/1‑61 (MQ=255)
                                                                                         gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAg                                                                                                                         <  2:321250/61‑1 (MQ=255)
                                                                                             tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg                                                                              <  1:729312/100‑1 (MQ=255)
                                                                                             tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg                                                                              >  2:729312/1‑100 (MQ=255)
                                                                                             tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga                                                    <  2:471699/126‑1 (MQ=255)
                                                                                             tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga                                                    >  1:471699/1‑126 (MQ=255)
                                                                                                  cccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCGATTGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATg                                  <  2:753963/139‑1 (MQ=255)
                                                                                                            ggTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg                        <  1:270346/139‑1 (MQ=255)
                                                                                                            ggTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg                        <  2:1122617/139‑1 (MQ=255)
                                                                                                            ggTTGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg                        <  1:5667/139‑1 (MQ=255)
                                                                                                              ttGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga                                                    <  2:581751/109‑1 (MQ=255)
                                                                                                              ttGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga                                                    >  1:581751/1‑109 (MQ=255)
                                                                                                              ttGGTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg                      >  2:1251207/1‑139 (MQ=255)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGt                                                                                                                       >  1:791718/1‑40 (MQ=38)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGt                                                                                                                       <  2:791718/40‑1 (MQ=38)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  1:600140/1‑63 (MQ=255)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  2:600140/63‑1 (MQ=255)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGcc                                                       <  1:658804/104‑1 (MQ=255)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGcc                                                       >  2:658804/1‑104 (MQ=255)
                                                                                                                ggTCATCTCAATCACATTACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg                    >  2:987112/1‑139 (MQ=255)
                                                                                                                                ttACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  1:318991/1‑47 (MQ=255)
                                                                                                                                ttACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  2:318991/47‑1 (MQ=255)
                                                                                                                                ttACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc                                                                             <  2:753290/66‑1 (MQ=255)
                                                                                                                                ttACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc                                                                             >  1:753290/1‑66 (MQ=255)
                                                                                                                                ttACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTATTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATc    >  2:794096/1‑139 (MQ=255)
                                                                                                                                 tACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCaaa                                                                                                     <  2:207750/41‑1 (MQ=255)
                                                                                                                                 tACGCACGCCCGGGTCATCAGGTCGTTCATCTCCTGGCaaa                                                                                                     >  1:207750/1‑41 (MQ=255)
                                                                                                                                  acgcacgcCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa  <  1:655469/139‑1 (MQ=255)
                                                                                                                                  acgcacgcCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa  <  1:1215206/139‑1 (MQ=255)
                                                                                                                                   cgcacgcCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                <  2:808487/44‑1 (MQ=255)
                                                                                                                                   cgcacgcCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc                                                                                                >  1:808487/1‑44 (MQ=255)
                                                                                                                                         |                                                                                                                                    
CATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAA  >  NC_000913/3508314‑3508583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: