| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,769,478 | (G)7→8 | coding (405/1113 nt) | ydiK → | UPF0118 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,769,471 | 1 | . | G | 100.0% | 77.9 / NA | 23 | M133R (ATG→AGG) | ydiK | UPF0118 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (12/11); total (12/11) | |||||||||||
CGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCC > NC_000913/1769357‑1769599 | cGCTAATTAAAGCCATTTCCAGCGGTGACATGAGGTTAACCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGACGCGCAGCGGTCTGCAGGCTGGCACGACATACTGGATAT‑‑GGGGGG‑GAACGGCGATCATGGCGa > 2:330021/1‑139 (MQ=255) aTTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTc < 1:399823/139‑1 (MQ=255) tAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCg < 2:1042912/139‑1 (MQ=255) aTGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacc > 2:579692/1‑139 (MQ=255) cGTTTCCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCt < 1:854852/139‑1 (MQ=255) gTTACCCGAGCTGGCGTGGCTTAATACCATTCCGGGGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTg < 1:330021/139‑1 (MQ=255) ttAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGG‑‑‑CACCACCACCTGGTTCGTTGGGCAGGCGGCGCata < 2:641266/139‑1 (MQ=255) ttCCGGTGATTGGCGCGAAGCTGTATGCCGCCTGGCCCAAATGGGCGGATAC‑‑GGGGGGTG‑CCGACGATCATGGCGAAAGTCCGCCCTTATATTGGCACAACCACCACCTGGTTCGTTGGGCAGCCGGCGCATTTccgac > 2:916172/1‑135 (MQ=255) ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCgg < 1:1098821/137‑1 (MQ=255) ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCgg > 2:1098821/1‑137 (MQ=255) tGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt < 2:82506/132‑1 (MQ=255) tGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt > 1:82506/1‑132 (MQ=255) tGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGt > 1:482218/1‑139 (MQ=255) gcgcGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGc > 2:639801/1‑139 (MQ=255) aGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGc < 1:1220865/37‑1 (MQ=37) aGGCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGc > 2:1220865/1‑37 (MQ=37) gCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCa > 2:1253765/1‑40 (MQ=38) gCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCa < 1:1253765/40‑1 (MQ=255) gCTGGCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtc > 1:486005/1‑139 (MQ=255) ggCACAACTTGCTGGATATGGGGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtctc > 2:1097853/1‑139 (MQ=255) ggCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTc > 1:820605/1‑48 (MQ=255) ggCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTc < 2:820605/48‑1 (MQ=39) ggCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTctct > 2:369512/1‑139 (MQ=255) ggCACAACTTGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTctct > 2:962908/1‑139 (MQ=255) tGCTGGATATG‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGAGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGccc < 2:451888/139‑1 (MQ=255) | CGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑‑GGGGGG‑G‑ACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCC > NC_000913/1769357‑1769599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |