| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,265,001 | 1086 bp→GAGG | [prfA] | [prfA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1265001 | 1266086 | 1086 | 20 [0] | [0] 20 | [prfA] | [prfA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1265000 | 0 (0.000) | 20 (0.390) +GAGG |
16/202 | 1.2 | 100% | intergenic (+30/‑12) | hemA/prfA | glutamyl tRNA reductase/peptide chain release factor RF‑1 |
| ? | NC_000913 | 1266087 = | 0 (0.000) | coding (1076/1083 nt) | prfA | peptide chain release factor RF‑1 | |||||
CCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACT > NC_000913/1265964‑1266204 | atgcgccaacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAatat < 2:983348‑M2/16‑1 (MQ=255) aacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACt > 1:215604‑M2/117‑139 (MQ=255) aacgaaatcacttcaacaggccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACt > 2:29213‑M2/117‑139 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggagga > 1:1079214‑M2/98‑101 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggagga < 2:1079214‑M2/4‑1 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaataat < 1:305055‑M2/9‑1 (MQ=255) gccgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGaataat > 2:305055‑M2/98‑106 (MQ=255) cgcccgtgacggggataacgaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGcc < 1:29213‑M2/44‑1 (MQ=255) gaacgcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAg > 2:153023‑M2/77‑139 (MQ=255) gcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggag > 1:158308‑M2/73‑74 (MQ=255) gcctgaatattctgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggag < 2:158308‑M2/2‑1 (MQ=255) tgcgcgacagcctcgggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCt > 2:967914‑M2/61‑139 (MQ=255) ggctggagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAg < 1:967914‑M2/94‑1 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGaataat < 1:61784‑M2/9‑1 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGaataat > 2:61784‑M2/41‑49 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCaa > 1:996898‑M2/41‑59 (MQ=255) gagtaacagtacatcattttctttttttacagggtggaggAGGAATAATGGAATATCaa < 2:996898‑M2/19‑1 (MQ=255) acatcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCaga > 1:121336‑M2/31‑139 (MQ=255) catcattttctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCagag > 1:353586‑M2/30‑139 (MQ=255) tctttttttacagggtggaggAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACt > 2:1047594‑M2/22‑139 (MQ=255) | CCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACT > NC_000913/1265964‑1266204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |