| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,804,068 | T→C | I24V (ATT→GTT) | waaB ← | lipopolysaccharide 1,6‑galactosyltransferase, UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,804,068 | 0 | T | C | 97.3% | 264.6 / ‑0.7 | 75 | I24V (ATT→GTT) | waaB | lipopolysaccharide 1,6‑galactosyltransferase, UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (42/31); minor base A (1/1); total (43/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.48e-01 | |||||||||||
CGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAA > NC_000913/3803935‑3804203 | cGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACAt > 1:1218994/1‑139 (MQ=255) aCCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATg < 2:599047/139‑1 (MQ=255) aCCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATg < 1:271643/139‑1 (MQ=255) aaCGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGt > 1:1069824/1‑139 (MQ=255) tatTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCAt > 2:735076/1‑139 (MQ=255) tatTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCAt > 1:713257/1‑139 (MQ=255) aTGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCaaa < 1:735076/139‑1 (MQ=255) aGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAAt > 2:922022/1‑131 (MQ=255) aGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAAt < 1:922022/131‑1 (MQ=255) tttAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACg > 1:1161329/1‑102 (MQ=255) tttAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACg < 2:1161329/102‑1 (MQ=255) cTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGAt > 2:993476/1‑139 (MQ=255) tCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATaa > 1:333538/1‑139 (MQ=255) tCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATaa > 2:355823/1‑139 (MQ=255) tCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATaa > 2:453736/1‑139 (MQ=255) tCCAGCCAACCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATaa > 1:842365/1‑139 (MQ=255) ccAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAAAAACATCACGGATGa > 2:448668/1‑96 (MQ=255) ccAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAAAAACATCACGGATGa < 1:448668/96‑1 (MQ=255) cAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAAc < 1:659746/139‑1 (MQ=255) tCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCa > 2:613167/1‑106 (MQ=255) tCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCa < 1:613167/106‑1 (MQ=255) tCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAg < 1:332507/119‑1 (MQ=255) tCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAg > 2:332507/1‑119 (MQ=255) cccTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACg < 2:604577/83‑1 (MQ=255) cccTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACg > 1:604577/1‑83 (MQ=255) cccTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTAttt > 2:815656/1‑139 (MQ=255) ccTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCa > 1:438084/1‑104 (MQ=255) ccTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCa < 2:438084/104‑1 (MQ=255) tCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAg < 1:815656/139‑1 (MQ=255) aTTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa < 2:1218994/139‑1 (MQ=255) ttttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAAc > 1:127890/1‑139 (MQ=255) tttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATa > 2:303548/1‑118 (MQ=255) tttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATa < 1:303548/118‑1 (MQ=255) tttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa > 1:540947/1‑137 (MQ=255) tttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa < 2:540947/137‑1 (MQ=255) tttGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAAct > 1:619301/1‑139 (MQ=255) tGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa > 2:621404/1‑135 (MQ=255) tGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa < 1:621404/135‑1 (MQ=255) cATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAAct > 1:596321/1‑134 (MQ=255) cATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAAct < 2:596321/134‑1 (MQ=255) cATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCAt > 2:243335/1‑139 (MQ=255) aTTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCAtt > 1:1290449/1‑139 (MQ=255) aCGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACtctc < 1:132631/133‑1 (MQ=255) aCGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACtctc > 2:132631/1‑133 (MQ=255) aCAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGa < 2:1069824/139‑1 (MQ=255) aaGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTaa > 2:679157/1‑139 (MQ=255) aCATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCAc < 2:417455/139‑1 (MQ=255) tttCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGt > 1:1076168/1‑139 (MQ=255) ttCACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGtt > 2:405046/1‑139 (MQ=255) cACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCa > 1:973388/1‑132 (MQ=255) cACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCa < 2:973388/132‑1 (MQ=255) cACTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGtttt > 1:684669/1‑139 (MQ=255) aCTTTGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTa < 2:713257/139‑1 (MQ=255) tttGGATATGTTGTTGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAAc < 1:355823/139‑1 (MQ=255) gttgttGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCt > 1:690265/1‑83 (MQ=255) gttgttGCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCt < 2:690265/83‑1 (MQ=255) tgttgCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTg < 2:1290449/139‑1 (MQ=255) gttgCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGt > 1:1296207/1‑139 (MQ=255) tgCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTaa > 2:34564/1‑124 (MQ=255) tgCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTaa < 1:34564/124‑1 (MQ=255) gCCTGAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCta > 1:559317/1‑139 (MQ=255) tGAAGGTAGTAACAACATCACGGATGACAGTTTCCAt < 1:1001370/37‑1 (MQ=255) tGAAGGTAGTAACAACATCACGGATGACAGTTTCCAt > 2:1001370/1‑37 (MQ=255) gAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCg > 2:134964/1‑61 (MQ=255) gAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCg < 1:134964/61‑1 (MQ=255) gAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTaa > 2:237602/1‑119 (MQ=255) gAAGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTaa < 1:237602/119‑1 (MQ=255) aaGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCt < 2:483323/57‑1 (MQ=255) aaGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCt > 1:483323/1‑57 (MQ=255) aaGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa < 1:651938/85‑1 (MQ=255) aaGGTAGTAACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGaaa > 2:651938/1‑85 (MQ=255) agtaACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATa > 1:989870/1‑76 (MQ=255) agtaACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATa < 2:989870/76‑1 (MQ=255) agtaACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGa > 1:661305/1‑139 (MQ=255) agtaACAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGa > 1:255725/1‑139 (MQ=255) taacaaCATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGaaa < 2:661305/139‑1 (MQ=255) | CGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAA > NC_000913/3803935‑3804203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |