| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,085,994 | (GT)5→4 | intergenic (‑172/‑21) | fdoG ← / → fdhD | formate dehydrogenase‑O, large subunit/formate dehydrogenase formation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,085,986 | 0 | G | . | 100.0% | 114.7 / NA | 28 | intergenic (‑164/‑30) | fdoG/fdhD | formate dehydrogenase‑O, large subunit/formate dehydrogenase formation protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (14/14); total (14/14) | |||||||||||
| * | NC_000913 | 4,085,987 | 0 | T | . | 100.0% | 114.7 / NA | 28 | intergenic (‑165/‑29) | fdoG/fdhD | formate dehydrogenase‑O, large subunit/formate dehydrogenase formation protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (14/14); total (14/14) | |||||||||||
ACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTAC > NC_000913/4085849‑4086103 || aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgt < 1:1335485/139‑1 (MQ=255) gTCCCATTTACGTTCGCTTGCTGCGTGTGCAGGTAGTGTGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt < 2:588599/139‑1 (MQ=255) gTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt < 2:1045908/139‑1 (MQ=255) tttACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttc > 2:171290/1‑137 (MQ=255) tttACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt < 2:869722/133‑1 (MQ=255) tttACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt > 1:869722/1‑133 (MQ=255) tCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGTCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt < 2:526030/126‑1 (MQ=255) tCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGTCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgt > 1:526030/1‑126 (MQ=255) cGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat < 1:245749/126‑7 (MQ=255) cGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat > 2:245749/1‑120 (MQ=255) gtgggagtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAac < 1:171290/139‑1 (MQ=255) tgggagtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGt > 1:1503947/1‑129 (MQ=255) tgggagtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGt < 2:1503947/129‑1 (MQ=255) ggagtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAAcaca < 2:1224909/139‑1 (MQ=255) tttCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGa > 2:79941/1‑139 (MQ=255) gCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACa < 1:79941/139‑1 (MQ=255) cGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat > 1:679185/1‑78 (MQ=255) cGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat < 2:679185/84‑7 (MQ=255) gTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat < 1:783730/77‑7 (MQ=255) gTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat > 2:783730/1‑71 (MQ=255) ggCTTAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat < 1:911228/67‑7 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGgtgtgtgttcttat > 2:911228/1‑61 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACa < 2:136179/120‑1 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACa > 1:136179/1‑120 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAata < 2:260191/124‑1 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAata > 1:260191/1‑124 (MQ=255) ggCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTc > 2:324060/1‑139 (MQ=255) gCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAAtgtg > 2:1241618/1‑116 (MQ=255) gCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAAtgtg < 1:1241618/116‑1 (MQ=255) catccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGt > 2:522725/1‑123 (MQ=255) catccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGt < 1:522725/123‑1 (MQ=255) tccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTa < 1:692351/133‑1 (MQ=255) tccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTa > 2:692351/1‑133 (MQ=255) tccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATg < 2:1397039/135‑1 (MQ=255) tccaGGAAGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATg > 1:1397039/1‑135 (MQ=255) aGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATca < 2:176661/103‑1 (MQ=255) aGGGTTTGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATca > 1:176661/1‑103 (MQ=255) tGTAACAGAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTac > 2:210104/1‑139 (MQ=255) gAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATcac > 2:1317627/1‑91 (MQ=255) gAATACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATcac < 1:1317627/91‑1 (MQ=255) aaTACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTc < 2:536465/101‑1 (MQ=255) aaTACCATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTc > 1:536465/1‑101 (MQ=255) cATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAg < 2:466669/104‑1 (MQ=255) cATAATGTTG‑‑GTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAg > 1:466669/1‑104 (MQ=255) || ACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTAC > NC_000913/4085849‑4086103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |