| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 788831 = | 0 (0.000) | 48 (0.800) | 36/206 | 0.5 | 97.0% | coding (7/1041 nt) coding (1149/1149 nt) |
galM galK |
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase |
| ? | NC_000913 | 3742633 = | 3 (0.050) | intergenic (‑101/‑100) | yiaJ/yiaK | transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent | |||||
CGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/788960‑788831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC > NC_000913/3742633‑3742765 CGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCC < 2:816246/139‑1 CTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAA > 1:226479/1‑139 ATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAA > 1:1531246/1‑139 GCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATAT < 2:1531246/139‑1 TGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATAT < 2:226479/139‑1 GCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGA > 2:1396447/1‑103 GCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGA < 1:1396447/103‑1 ACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTT > 2:1491789/1‑139 ACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGA > 1:542571/1‑98 ACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGA < 2:542571/98‑1 AGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGCAAACCATCACAAGGAGCAGGACAGTGCTGACAGATAGCCTTGTTAAAAAGTGATCGATATATTTGAAATAAAGTTTCGCAT > 1:1237779/1‑139 TGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATT > 1:1147973/1‑139 CAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGAATATTGAAATTTTAA > 2:1332562/1‑139 AGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAA > 1:459500/1‑139 AAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAgcg < 2:1030530/139‑4 AAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGA > 1:313425/1‑139 TATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAA > 1:1070378/1‑74 TATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAA < 2:1070378/74‑1 TAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATA > 2:1494999/1‑81 TAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATA < 1:1494999/81‑1 AGACGTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGA < 2:1147973/139‑1 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAA < 2:1494940/131‑1 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAA > 1:1494940/1‑131 GTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATG < 1:1491789/139‑1 TGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAA > 1:1393459/1‑139 TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGT < 1:1332562/139‑1 TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTT > 1:1019344/1‑139 TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTT < 1:715095/70‑1 TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTT > 2:715095/1‑70 CAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG < 2:650917/139‑1 CAAGGAGCAGCACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCAAAGTGAAATTATAAGCAAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG < 2:1014254/139‑1 AGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCA < 2:381242/139‑1 CAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCC > 2:378940/1‑110 CAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCC < 1:378940/110‑1 GACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAG < 2:1019344/139‑1 GACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAG < 1:445435/139‑1 ACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGC < 2:313425/139‑1 GTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG < 2:1455962/125‑1 GTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG > 1:1455962/1‑125 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC > 1:198784/1‑139 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG > 1:1183340/1‑124 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG < 2:1183340/124‑1 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGA > 2:1486140/1‑107 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGA < 1:1486140/107‑1 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCG < 2:38117/82‑1 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCG > 1:38117/1‑82 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATC < 1:1094553/46‑1 TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATC > 2:1094553/1‑46 CGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/788960‑788831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC > NC_000913/3742633‑3742765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |