| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 74 [0] | [0] 74 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 74 (1.240) | 51/206 | 0.1 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
GTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4489978‑4490115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGA > NC_000913/4490127‑4490261 GTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAG > 1:1097880/1‑139 ATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAG < 1:60435/139‑1 CCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAA > 1:366386/1‑139 CATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT < 2:1023967/139‑1 CATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTG < 2:1011300/139‑1 CCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 2:521962/1‑139 CCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCC < 2:366386/139‑1 TCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGA > 1:365104/1‑98 TCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGA < 2:365104/98‑1 TGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCG < 1:521962/139‑1 TGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT > 2:472004/1‑102 TGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAAT < 1:472004/102‑1 TGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCATCGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG > 2:630161/1‑139 GGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGACAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA < 2:1240925/139‑1 GTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGCCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAG < 2:1097880/139‑1 GGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCATCGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTT < 1:630161/139‑1 TTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGCGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGCGATGTGGATGTGATCGTTA > 2:1518727/1‑139 CACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTT < 2:571152/136‑1 CACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTT > 1:571152/1‑136 TCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTT > 1:745904/1‑139 AGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTT > 2:1208111/1‑139 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTC > 2:1486484/1‑139 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG < 2:1492798/96‑1 TCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG > 1:1492798/1‑96 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAG < 1:1208111/139‑1 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTT < 1:43616/126‑1 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTT > 2:43616/1‑126 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 1:382989/1‑72 CTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC < 2:382989/72‑1 CCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCA > 1:467580/1‑139 CCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGA < 2:1470854/91‑1 CCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGA > 1:1470854/1‑91 AGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA > 2:1361278/1‑95 AGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA < 1:1361278/95‑1 TTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATAC < 1:909778/83‑1 TTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATAC > 2:909778/1‑83 TCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA < 1:720009/91‑1 TCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA > 2:720009/1‑91 CCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAA > 1:973555/1‑54 CCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAA < 2:973555/54‑1 CCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCG < 1:1486484/139‑1 GGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 2:1203939/1‑56 GGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC < 1:1203939/56‑1 AGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG > 2:491470/1‑76 AGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAG < 1:491470/76‑1 TAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC < 1:403262/50‑1 TAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 2:403262/1‑50 AGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA > 2:949759/1‑76 AGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTACCGTGATAAATCTGATACCCGAGGTCAA < 1:949759/76‑1 AACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAAT > 1:986818/1‑139 ACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTG > 2:1333313/1‑106 ACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTG < 1:1333313/106‑1 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATAT > 2:1497813/1‑139 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC < 1:309672/62‑1 CGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC > 2:309672/1‑62 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATC > 2:924170/1‑139 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATC > 2:528158/1‑139 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCG < 2:517127/89‑1 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCG > 1:517127/1‑89 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGGGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATC > 1:1341428/1‑139 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC > 2:1507591/1‑61 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCC < 1:1507591/61‑1 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATA < 2:1482431/49‑1 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATA > 1:1482431/1‑49 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCC > 2:1490552/1‑43 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCC < 1:1490552/43‑1 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC < 2:560873/42‑1 GTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGC > 1:560873/1‑42 TCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAG < 2:1534142/71‑1 TCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAG > 1:1534142/1‑71 CAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACG < 2:986818/139‑1 GAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGA < 1:528158/139‑1 AGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA < 2:1039589/58‑1 AGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAA > 1:1039589/1‑58 GTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4489978‑4490115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGA > NC_000913/4490127‑4490261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |